RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 NAE1Q13564 534 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 C18orf21Q32NC0 220 aaPredicted RBP11.85□□□□□ -0.51
SCARB1-204ENST00000535005 PTCHD3Q3KNS1 767 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 ZNF678Q5SXM1 525 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 EPGNQ6UW88 154 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 BNC2Q6ZN30 1099 aaPredicted RBP11.85□□□□□ -0.51
SCARB1-204ENST00000535005 ASCL5Q7RTU5 278 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 LRRC70Q7Z2Q7 622 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 HPS6Q86YV9 775 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 SYTL1Q8IYJ3 562 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 METTL25Q8N6Q8 603 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 OR4E2Q8NGC2 313 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 RP9Q8TA86 221 aaKnown RBP11.85□□□□□ -0.51
SCARB1-204ENST00000535005 SETD7Q8WTS6 366 aaKnown RBP11.85□□□□□ -0.51
SCARB1-204ENST00000535005 CCDC124Q96CT7 223 aaKnown RBP11.85□□□□□ -0.51
SCARB1-204ENST00000535005 SORT1Q99523 831 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 SLC38A3Q99624 504 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 GATA5Q9BWX5 397 aaPredicted RBP11.85□□□□□ -0.51
SCARB1-204ENST00000535005 MRPL1Q9BYD6 325 aaKnown RBP11.85□□□□□ -0.51
SCARB1-204ENST00000535005 ATG10Q9H0Y0 220 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 SRMSQ9H3Y6 488 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 SLC32A1Q9H598 525 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 XKR8Q9H6D3 395 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 PLGRKTQ9HBL7 147 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 EVA1BQ9NVM1 165 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 FAIMQ9NVQ4 179 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 RSL24D1Q9UHA3 163 aaKnown RBP11.85□□□□□ -0.51
SCARB1-204ENST00000535005 SH3GLB1Q9Y371 365 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 PCDHGA4Q9Y5G9 962 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 ANKRD12Q6UB98 2062 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 PRSS51A0A1B0GVH4 220 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 C4orf47A7E2U8 309 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 K7EPI3 171 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 CBFA2T3O75081 653 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 SIX3O95343 332 aaPredicted RBP11.84□□□□□ -0.51
SCARB1-204ENST00000535005 C8BP07358 591 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 EEF1DP29692 281 aaKnown RBP11.84□□□□□ -0.51
SCARB1-204ENST00000535005 ALDH3B2P48448 385 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 HSPA7P48741 367 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 NAGLUP54802 743 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 TXNL4AP83876 142 aaKnown RBP11.84□□□□□ -0.51
SCARB1-204ENST00000535005 FASTKQ14296 549 aaKnown RBP11.84□□□□□ -0.51
SCARB1-204ENST00000535005 PLCL1Q15111 1095 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 UNC50Q53HI1 259 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 CAPN13Q6MZZ7 669 aaPredicted RBP11.84□□□□□ -0.51
SCARB1-204ENST00000535005 KLHL35Q6PF15 583 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 FRMD7Q6ZUT3 714 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 ADGRF3Q8IZF5 1079 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 CPSF7Q8N684 471 aaKnown RBP11.84□□□□□ -0.51
SCARB1-204ENST00000535005 POU5F2Q8N7G0 328 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 ZBTB8BQ8NAP8 495 aaPredicted RBP11.84□□□□□ -0.51
SCARB1-204ENST00000535005 NAT6Q93015 286 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 PHOX2BQ99453 314 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 NRTNQ99748 197 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 GRIP2Q9C0E4 1043 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 PCBD2Q9H0N5 130 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 ZNF395Q9H8N7 513 aaPredicted RBP11.84□□□□□ -0.51
SCARB1-204ENST00000535005 CCDC177Q9NQR7 707 aaPredicted RBP11.84□□□□□ -0.51
SCARB1-204ENST00000535005 INTS7Q9NVH2 962 aaKnown RBP11.84□□□□□ -0.51
SCARB1-204ENST00000535005 TUBA8Q9NY65 449 aaPredicted RBP11.84□□□□□ -0.51
SCARB1-204ENST00000535005 UBAP1Q9NZ09 502 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 PCTPQ9UKL6 214 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 BLOC1S6Q9UL45 172 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 ASB1Q9Y576 335 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 ENTPD2Q9Y5L3 495 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 CEPT1Q9Y6K0 416 aa11.84□□□□□ -0.51
SCARB1-204ENST00000535005 A0A1W2PPV9 198 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 SLCO1B7G3V0H7 640 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 BTN3A3O00478 584 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 E2F3O00716 465 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 LDOC1O95751 146 aaPredicted RBP11.83□□□□□ -0.51
SCARB1-204ENST00000535005 CHRM5P08912 532 aaPredicted RBP11.83□□□□□ -0.51
SCARB1-204ENST00000535005 SERPINB5P36952 375 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 GDF5P43026 501 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 PIK3CGP48736 1102 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 CD97P48960 835 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 LIMK1P53667 647 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 TBPL1P62380 186 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 PCDH1Q08174 1060 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 SQSTM1Q13501 440 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 FLOT2Q14254 428 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 KIR2DS3Q14952 304 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 LCTLQ6UWM7 567 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 MAVSQ7Z434 540 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 THOC6Q86W42 341 aaKnown RBP11.83□□□□□ -0.51
SCARB1-204ENST00000535005 PGAM4Q8N0Y7 254 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 BAHD1Q8TBE0 780 aaPredicted RBP11.83□□□□□ -0.51
SCARB1-204ENST00000535005 RHBDD1Q8TEB9 315 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 JPH3Q8WXH2 748 aaPredicted RBP11.83□□□□□ -0.51
SCARB1-204ENST00000535005 ESAMQ96AP7 390 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 SLC22A18Q96BI1 424 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 VPS50Q96JG6 964 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 TRMOQ9BU70 441 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 OSBPL11Q9BXB4 747 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 RAB33BQ9H082 229 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 DNAJC11Q9NVH1 559 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 OPTCQ9UBM4 332 aa11.83□□□□□ -0.51
SCARB1-204ENST00000535005 GVINP1Q7Z2Y8 2422 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 COL5A1P20908 1838 aaPredicted RBP11.83□□□□□ -0.52
SCARB1-204ENST00000535005 SH3PXD2BA1X283 911 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms