RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 CABS1Q96KC9 395 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 CCDC138Q96M89 665 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 AGAP4Q96P64 663 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 LMF1Q96S06 567 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 EBNA1BP2Q99848 306 aaKnown RBP9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 WDR77Q9BQA1 342 aaPredicted RBP9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 CRB3Q9BUF7 120 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 CCDC68Q9H2F9 335 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 TMEM184CQ9NVA4 438 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 UTP6Q9NYH9 597 aaKnown RBP9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 SUCOQ9UBS9 1254 aaKnown RBP9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 C3orf18Q9UK00 162 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 ADAMTS6Q9UKP5 1117 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 CDC14AQ9UNH5 594 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 NOVA2Q9UNW9 492 aaKnown RBP9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 PDE10AQ9Y233 779 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 LOC102723996A0A087X1L8 192 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 GOLGA6L10A0A0M3HER8 536 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 H7BY64 318 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 TXNDC9O14530 226 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 TP73O15350 636 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 SLC16A5O15375 505 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 ZSCAN12O43309 604 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 BANF1O75531 89 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 KLHL18O94889 574 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 TSPAN12O95859 305 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 ERVK-10P10266 1014 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 CD1EP15812 388 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 CAPN3P20807 821 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 FBLP22087 321 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 SOX11P35716 441 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 CDKN2DP55273 166 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 PPP1R7Q15435 360 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 HIF1AQ16665 826 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 SPANXN3Q5MJ09 141 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 RBM20Q5T481 1227 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 TEDDM1Q5T9Z0 273 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 LRRC8EQ6NSJ5 796 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 PAQR3Q6TCH7 311 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 KIAA0408Q6ZU52 694 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 NDUFAF7Q7L592 441 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 VN1R4Q7Z5H5 301 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 PSMF1Q92530 271 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 RELTQ969Z4 430 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 C8orf44Q96CB5 159 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 TM4SF19Q96DZ7 209 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 THOC3Q96J01 351 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 PRAP1Q96NZ9 151 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 NDNQ99608 321 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 WDR83Q9BRX9 315 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 SARGQ9BW04 601 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 DRC3Q9H069 523 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 DDX47Q9H0S4 455 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 PARVBQ9HBI1 364 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 MKKSQ9NPJ1 570 aaPredicted RBP9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 C14orf105Q9NVL8 296 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 TAS2R13Q9NYV9 303 aa9.54□□□□□ -0.88
CLSTN3-203ENST00000534830 IGHV1-45A0A0A0MS14 117 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 IDSB3KWA1 339 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 H0YIG0 161 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 PCDH17O14917 1159 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 PRPF4O43172 522 aaKnown RBP eCLIP9.53□□□□□ -0.886e-6■■■■□ 19.9
CLSTN3-203ENST00000534830 LCMT2O60294 686 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 JRKO75564 520 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 BMP10O95393 424 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 SYF2O95926 243 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 C8GP07360 202 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 PRR35P0CG20 571 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 ACPPP15309 386 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 TCP1P17987 556 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 TSFMP43897 325 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 EMP2P54851 167 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 KCNK10P57789 538 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 RPS15AP62244 130 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 TBPL1P62380 186 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 CSNK1G2P78368 415 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 CBLBQ13191 982 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 SP140Q13342 867 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 TSTA3Q13630 321 aaPredicted RBP9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 FRG1Q14331 258 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 B3GNTL1Q67FW5 361 aaPredicted RBP9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 STEAP4Q687X5 459 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 RPUSD3Q6P087 351 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 FAM180AQ6UWF9 173 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 LCTLQ6UWM7 567 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 MBOAT1Q6ZNC8 495 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 CREG2Q8IUH2 290 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 PLD3Q8IV08 490 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 ZC3H7AQ8IWR0 971 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 PRSS58Q8IYP2 241 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 SHISA5Q8N114 240 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 ZNF808Q8N4W9 903 aaPredicted RBP9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 DNAJB14Q8TBM8 379 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 MCOLN3Q8TDD5 553 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 RERGQ96A58 199 aaPredicted RBP9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 THAP11Q96EK4 314 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 MMABQ96EY8 250 aaPredicted RBP9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 CERS2Q96G23 380 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 CCDC120Q96HB5 630 aa9.53□□□□□ -0.88
CLSTN3-203ENST00000534830 CNDP1Q96KN2 507 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms