RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 MYBPC3Q14896 1274 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 TSNQ15631 228 aaKnown RBP9.13□□□□□ -0.95
SSBP3-215ENST00000533946 EIF2S3LQ2VIR3 472 aaKnown RBP9.13□□□□□ -0.95
SSBP3-215ENST00000533946 PCGF5Q86SE9 256 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 SIRT6Q8N6T7 355 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 TMEM102Q8N9M5 508 aaPredicted RBP9.13□□□□□ -0.95
SSBP3-215ENST00000533946 OR56A3Q8NH54 315 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 FBXO25Q8TCJ0 367 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 MAGEC3Q8TD91 643 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 NEIL2Q969S2 332 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 FKBP10Q96AY3 582 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 MIEF2Q96C03 454 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 SNRNP40Q96DI7 357 aaKnown RBP9.13□□□□□ -0.95
SSBP3-215ENST00000533946 NPAS2Q99743 824 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 WDR54Q9H977 334 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 CCDC177Q9NQR7 707 aaPredicted RBP9.13□□□□□ -0.95
SSBP3-215ENST00000533946 ARL15Q9NXU5 204 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 VPS9D1Q9Y2B5 631 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 PADI2Q9Y2J8 665 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 CPAMD8Q8IZJ3 1885 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 SPTBN1Q01082 2364 aaKnown RBP9.12□□□□□ -0.95
SSBP3-215ENST00000533946 A0A0G2JN53 185 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 MYOCOSA0A1B0GUC4 107 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 TCRBV9S1A1TA0A576 114 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 HMX2A2RU54 273 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 NCF1BA6NI72 391 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-215ENST00000533946 NCF1CA8MVU1 366 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-215ENST00000533946 FAM227AF5H4B4 570 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 CCDC188H7C350 402 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 PFDN6O15212 129 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 ZNHIT1O43257 154 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 CDC123O75794 336 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-215ENST00000533946 BMP10O95393 424 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 ALBP02768 609 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 C8GP07360 202 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 ITGAMP11215 1152 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 NCF1P14598 390 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-215ENST00000533946 EZRP15311 586 aaKnown RBP9.12□□□□□ -0.95
SSBP3-215ENST00000533946 ZNF37AP17032 561 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-215ENST00000533946 EPORP19235 508 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 CASQ1P31415 396 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 EMP2P54851 167 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 IL2P60568 153 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 ETF1P62495 437 aaKnown RBP9.12□□□□□ -0.95
SSBP3-215ENST00000533946 DSG2Q14126 1118 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 PCOLCEQ15113 449 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 RBBP7Q16576 425 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 MUM1Q2TAK8 710 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 FAM214AQ32MH5 1076 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 ARMC3Q5W041 872 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 FCRLBQ6BAA4 426 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 TMEM214Q6NUQ4 689 aaKnown RBP9.12□□□□□ -0.95
SSBP3-215ENST00000533946 KIAA0408Q6ZU52 694 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 SYDE1Q6ZW31 735 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-215ENST00000533946 CMC1Q7Z7K0 106 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 CCDC25Q86WR0 208 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 ZGRF1Q86YA3 2104 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 LMNTD2Q8IXW0 634 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 MYO1HQ8N1T3 1032 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 RNF175Q8N4F7 328 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 NOA1Q8NC60 698 aaKnown RBP9.12□□□□□ -0.95
SSBP3-215ENST00000533946 OR4K1Q8NGD4 311 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 MCOLN3Q8TDD5 553 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 BRIX1Q8TDN6 353 aaKnown RBP9.12□□□□□ -0.95
SSBP3-215ENST00000533946 SREK1Q8WXA9 508 aaKnown RBP9.12□□□□□ -0.95
SSBP3-215ENST00000533946 TSLPQ969D9 159 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 FBXL8Q96CD0 374 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 MRRFQ96E11 262 aaKnown RBP9.12□□□□□ -0.95
SSBP3-215ENST00000533946 THOC3Q96J01 351 aaKnown RBP9.12□□□□□ -0.95
SSBP3-215ENST00000533946 VPS39Q96JC1 886 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 WDR77Q9BQA1 342 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-215ENST00000533946 TMEM79Q9BSE2 394 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 LRRC1Q9BTT6 524 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 VN1R1Q9GZP7 353 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 LRRC4CQ9HCJ2 640 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 TMEM184CQ9NVA4 438 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 ZNF282Q9UDV7 671 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-215ENST00000533946 SLC22A14Q9Y267 594 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 ZNF451Q9Y4E5 1061 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 COMMD10Q9Y6G5 202 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 ITPR2Q14571 2701 aa9.12□□□□□ -0.95
SSBP3-215ENST00000533946 CROCCQ5TZA2 2017 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 LRRC14BA6NHZ5 514 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 FAM159BA6NKW6 160 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 TGFBR3LH3BV60 316 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 PEX12O00623 359 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 OR1F1O43749 312 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 SEC24DO94855 1032 aaPredicted RBP9.11□□□□□ -0.95
SSBP3-215ENST00000533946 FKBP9O95302 570 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 SERPIND1P05546 499 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 PAFAH1B1P43034 410 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 AGTR2P50052 363 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 SOX8P57073 446 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 RAB8AP61006 207 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 BTG2P78543 158 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 ABATP80404 500 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 IRF9Q00978 393 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 GUCY2DQ02846 1103 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 CBLBQ13191 982 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 BMPR2Q13873 1038 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms