RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 LIPAP38571 399 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 B4GALNT1Q00973 533 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 HIST2H2ACQ16777 129 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-226ENST00000533820 INO80DQ53TQ3 878 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-226ENST00000533820 P3H2Q8IVL5 708 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 LSMEM1Q8N8F7 131 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 GPR156Q8NFN8 814 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 MYLIPQ8WY64 445 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 COPS8Q99627 209 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 KLF16Q9BXK1 252 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-226ENST00000533820 ROGDIQ9GZN7 287 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 NINQ8N4C6 2090 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 MAGEB17A8MXT2 336 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 WBP4O75554 376 aaKnown RBP18.7■□□□□ 0.58
CAPN1-226ENST00000533820 FPR1P21462 350 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 CTSOP43234 321 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-226ENST00000533820 OR1E2P47887 323 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 IL18R1Q13478 541 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 UGT8Q16880 541 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 CAPN13Q6MZZ7 669 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-226ENST00000533820 ZZZ3Q8IYH5 903 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 SPPL2AQ8TCT8 520 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 S100ZQ8WXG8 99 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 HTATIP2Q9BUP3 242 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 DCSTAMPQ9H295 470 aa18.7■□□□□ 0.58
CAPN1-226ENST00000533820 HSMCR30P0CW71 290 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 POU2F1P14859 743 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 ACPPP15309 386 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 KIAA1614Q5VZ46 1190 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 AKAP14Q86UN6 197 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 AUTS2Q8WXX7 1259 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 IRF2BPLQ9H1B7 796 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 TMEM184CQ9NVA4 438 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 KCTD5Q9NXV2 234 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 RAPGEFL1Q9UHV5 662 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 MAN2B2Q9Y2E5 1009 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 M0QX08 132 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 MTRF1O75570 445 aaKnown RBP18.69■□□□□ 0.58
CAPN1-226ENST00000533820 MAGEA2P43356 314 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 P2RX3P56373 397 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 NPRL3Q12980 569 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 CAMK2GQ13555 558 aaPredicted RBP18.69■□□□□ 0.58
CAPN1-226ENST00000533820 ZC3H12BQ5HYM0 836 aaKnown RBP18.69■□□□□ 0.58
CAPN1-226ENST00000533820 DGKKQ5KSL6 1271 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 SYT6Q5T7P8 510 aaPredicted RBP18.69■□□□□ 0.58
CAPN1-226ENST00000533820 FRG2Q64ET8 278 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 CRTC1Q6UUV9 634 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 MACC1Q6ZN28 852 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 PLEKHG7Q6ZR37 379 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 PTOV1Q86YD1 416 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 LMNTD1Q8N9Z9 388 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 FRG2BQ96QU4 278 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 SLC29A3Q9BZD2 475 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 DSN1Q9H410 356 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 CWH43Q9H720 699 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 NEK6Q9HC98 313 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 NECTIN3Q9NQS3 549 aa18.69■□□□□ 0.58
CAPN1-226ENST00000533820 TMEM88BA6NKF7 163 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 GBAP04062 536 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 PRPS2P11908 318 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 AMD1P17707 334 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 TGM1P22735 817 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 GTF2E2P29084 291 aaKnown RBP18.68■□□□□ 0.58
CAPN1-226ENST00000533820 AP1S1P61966 158 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 DUOXA1Q1HG43 343 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 TCTN1Q2MV58 587 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 MED8Q96G25 268 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 VMP1Q96GC9 406 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 COPS4Q9BT78 406 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 SLIRPQ9GZT3 109 aaKnown RBP18.68■□□□□ 0.58
CAPN1-226ENST00000533820 PCDH10Q9P2E7 1040 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 NDRG4Q9ULP0 352 aaKnown RBP18.68■□□□□ 0.58
CAPN1-226ENST00000533820 OR51B4Q9Y5P0 310 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 AGRPO00253 132 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 RRM2P31350 389 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 IRF8Q02556 426 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 MICAL3Q7RTP6 2002 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 RNF180Q86T96 592 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 ENTHD1Q8IYW4 607 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 OR52E4Q8NGH9 312 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 BTBD2Q9BX70 525 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 CAB39Q9Y376 341 aaPredicted RBP18.68■□□□□ 0.58
CAPN1-226ENST00000533820 UGT2A1Q9Y4X1 527 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 MYOFQ9NZM1 2061 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 GADD45AP24522 165 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 AOAHP28039 575 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 NSG1P42857 185 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 UTP15Q8TED0 518 aaKnown RBP18.68■□□□□ 0.58
CAPN1-226ENST00000533820 FBLIM1Q8WUP2 373 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 ZNF566Q969W8 418 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 VPS35Q96QK1 796 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 CITED4Q96RK1 184 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 UCKL1Q9NWZ5 548 aa18.68■□□□□ 0.58
CAPN1-226ENST00000533820 OR2AG2A6NM03 316 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 H3BUI4 141 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 AIREO43918 545 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 JUNDP17535 347 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 ABRQ12979 859 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 STK11Q15831 433 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 RETSATQ6NUM9 610 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms