RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 ITGAMP11215 1152 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 HIST1H2ADP20671 130 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 GRK3P35626 688 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 SOX11P35716 441 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 FNTAP49354 379 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 TNFSF10P50591 281 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 CRYMQ14894 314 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 PCOLCEQ15113 449 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 RPUSD3Q6P087 351 aaKnown RBP16.87■□□□□ 0.29
PCF11-206ENST00000533018 MBOAT1Q6ZNC8 495 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 PRSS41Q7RTY9 318 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 C17orf64Q86WR6 236 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 LURAP1LQ8IV03 231 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 SUN3Q8TAQ9 357 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 ZCCHC10Q8TBK6 192 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 HAS2Q92819 552 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 HIST1H2AHQ96KK5 128 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 OSBPL9Q96SU4 736 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 HIST1H2AJQ99878 128 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 H2AFJQ9BTM1 129 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 TUBB6Q9BUF5 446 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 ZNF700Q9H0M5 742 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 PCBD2Q9H0N5 130 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 PARVBQ9HBI1 364 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 PPANQ9NQ55 473 aaKnown RBP16.87■□□□□ 0.29
PCF11-206ENST00000533018 HCN3Q9P1Z3 774 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 PDE10AQ9Y233 779 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 CREBBPQ92793 2442 aa16.87■□□□□ 0.29
PCF11-206ENST00000533018 MYO9AB2RTY4 2548 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 LOC102723996A0A087X1L8 192 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 IGHV3-20A0A0C4DH32 117 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 A8MUI8 341 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 H0YIG0 161 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 BANF1O75531 89 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 SEC24DO94855 1032 aaPredicted RBP16.86■□□□□ 0.29
PCF11-206ENST00000533018 NSA2O95478 260 aaKnown RBP16.86■□□□□ 0.29
PCF11-206ENST00000533018 WDPCPO95876 746 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 IL1RNP18510 177 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 DCTP40126 519 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 SNRPNP63162 240 aaKnown RBP16.86■□□□□ 0.29
PCF11-206ENST00000533018 ZNF33BQ06732 778 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 DHX9Q08211 1270 aaKnown RBP16.86■□□□□ 0.29
PCF11-206ENST00000533018 NAE1Q13564 534 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 RNASEH2BQ5TBB1 312 aaKnown RBP16.86■□□□□ 0.29
PCF11-206ENST00000533018 ABHD17BQ5VST6 288 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 HIBCHQ6NVY1 386 aaPredicted RBP16.86■□□□□ 0.29
PCF11-206ENST00000533018 AGTRAPQ6RW13 159 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 PAQR3Q6TCH7 311 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 TMEM205Q6UW68 189 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 VN1R4Q7Z5H5 301 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 SLC35F6Q8N357 371 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 AMER2Q8N7J2 671 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 CAMKVQ8NCB2 501 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 C2CD4AQ8NCU7 369 aaPredicted RBP16.86■□□□□ 0.29
PCF11-206ENST00000533018 OR51Q1Q8NH59 317 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 ACTRT1Q8TDG2 376 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 CYTH2Q99418 400 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 VN1R1Q9GZP7 353 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 ANKHQ9HCJ1 492 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 STMN3Q9NZ72 180 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 TEKT2Q9UIF3 430 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 CPAMD8Q8IZJ3 1885 aa16.86■□□□□ 0.29
PCF11-206ENST00000533018 MYO7BQ6PIF6 2116 aa16.85■□□□□ 0.29
PCF11-206ENST00000533018 KCNE1BA0A087WTH5 132 aa16.85■□□□□ 0.29
PCF11-206ENST00000533018 A0A1W2PQ72 361 aa16.85■□□□□ 0.29
PCF11-206ENST00000533018 SGK494L7N484 410 aa16.85■□□□□ 0.29
PCF11-206ENST00000533018 TTC4O95801 387 aa16.85■□□□□ 0.29
PCF11-206ENST00000533018 MYBL2P10244 700 aa16.85■□□□□ 0.29
PCF11-206ENST00000533018 CCND1P24385 295 aa16.85■□□□□ 0.29
PCF11-206ENST00000533018 XCR1P46094 333 aa16.85■□□□□ 0.29
PCF11-206ENST00000533018 CSNK1G2P78368 415 aa16.85■□□□□ 0.29
PCF11-206ENST00000533018 BBS9Q3SYG4 887 aa16.85■□□□□ 0.29
PCF11-206ENST00000533018 CPEB2Q7Z5Q1 589 aaKnown RBP16.85■□□□□ 0.29
PCF11-206ENST00000533018 PCGF5Q86SE9 256 aa16.85■□□□□ 0.29
PCF11-206ENST00000533018 SLC13A3Q8WWT9 602 aa16.85■□□□□ 0.29
PCF11-206ENST00000533018 THAP11Q96EK4 314 aa16.85■□□□□ 0.29
PCF11-206ENST00000533018 LINGO1Q96FE5 620 aa16.85■□□□□ 0.29
PCF11-206ENST00000533018 SLX1AQ9BQ83 275 aa16.85■□□□□ 0.29
PCF11-206ENST00000533018 C19orf25Q9UFG5 118 aaPredicted RBP16.85■□□□□ 0.29
PCF11-206ENST00000533018 SH2B3Q9UQQ2 575 aa16.85■□□□□ 0.29
PCF11-206ENST00000533018 CROCCQ5TZA2 2017 aa16.85■□□□□ 0.29
PCF11-206ENST00000533018 OR2W5A6NFC9 320 aa16.84■□□□□ 0.29
PCF11-206ENST00000533018 DNALI1O14645 258 aaPredicted RBP16.84■□□□□ 0.29
PCF11-206ENST00000533018 SLC16A5O15375 505 aa16.84■□□□□ 0.29
PCF11-206ENST00000533018 SLC35G6P0C7Q6 338 aa16.84■□□□□ 0.29
PCF11-206ENST00000533018 CDH1P12830 882 aa16.84■□□□□ 0.29
PCF11-206ENST00000533018 BCL6P41182 706 aa16.84■□□□□ 0.29
PCF11-206ENST00000533018 EFNA3P52797 238 aa16.84■□□□□ 0.29
PCF11-206ENST00000533018 CDKN2DP55273 166 aa16.84■□□□□ 0.29
PCF11-206ENST00000533018 KCNK10P57789 538 aa16.84■□□□□ 0.29
PCF11-206ENST00000533018 SP140Q13342 867 aa16.84■□□□□ 0.29
PCF11-206ENST00000533018 PDAP1Q13442 181 aaKnown RBP16.84■□□□□ 0.29
PCF11-206ENST00000533018 BTBD16Q32M84 506 aa16.84■□□□□ 0.29
PCF11-206ENST00000533018 SPANXN3Q5MJ09 141 aa16.84■□□□□ 0.29
PCF11-206ENST00000533018 RBM20Q5T481 1227 aaKnown RBP16.84■□□□□ 0.29
PCF11-206ENST00000533018 CAPN13Q6MZZ7 669 aaPredicted RBP16.84■□□□□ 0.29
PCF11-206ENST00000533018 TMEM214Q6NUQ4 689 aaKnown RBP16.84■□□□□ 0.29
PCF11-206ENST00000533018 LANCL3Q6ZV70 420 aa16.84■□□□□ 0.29
PCF11-206ENST00000533018 ASPGQ86U10 573 aa16.84■□□□□ 0.29
PCF11-206ENST00000533018 FJX1Q86VR8 437 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms