RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 GRHL1Q9NZI5 618 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 B3GNT3Q9Y2A9 372 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 VWA7Q9Y334 891 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 UTP11Q9Y3A2 253 aaKnown RBP16.89■□□□□ 0.29
SMG1-203ENST00000532700 SCN2AQ99250 2005 aa16.88■□□□□ 0.29
SMG1-203ENST00000532700 NPEPPSL1A6NEC2 478 aa16.88■□□□□ 0.29
SMG1-203ENST00000532700 CXorf49A8MYA2 514 aaPredicted RBP16.88■□□□□ 0.29
SMG1-203ENST00000532700 RAD51CO43502 376 aa16.88■□□□□ 0.29
SMG1-203ENST00000532700 ACPPP15309 386 aa16.88■□□□□ 0.29
SMG1-203ENST00000532700 SAT1P21673 171 aa16.88■□□□□ 0.29
SMG1-203ENST00000532700 RGS4P49798 205 aa16.88■□□□□ 0.29
SMG1-203ENST00000532700 TAS2R39P59534 338 aa16.88■□□□□ 0.29
SMG1-203ENST00000532700 OCA2Q04671 838 aa16.88■□□□□ 0.29
SMG1-203ENST00000532700 CALCOCO2Q13137 446 aa16.88■□□□□ 0.29
SMG1-203ENST00000532700 PDAP1Q13442 181 aaKnown RBP16.88■□□□□ 0.29
SMG1-203ENST00000532700 C18orf21Q32NC0 220 aaPredicted RBP16.88■□□□□ 0.29
SMG1-203ENST00000532700 CATSPEREQ5SY80 951 aa16.88■□□□□ 0.29
SMG1-203ENST00000532700 HIST2H2BCQ6DN03 193 aa16.88■□□□□ 0.29
SMG1-203ENST00000532700 UGT3A1Q6NUS8 523 aa16.88■□□□□ 0.29
SMG1-203ENST00000532700 Q6ZS92 163 aa16.88■□□□□ 0.29
SMG1-203ENST00000532700 LANCL3Q6ZV70 420 aa16.88■□□□□ 0.29
SMG1-203ENST00000532700 GALNT11Q8NCW6 608 aa16.88■□□□□ 0.29
SMG1-203ENST00000532700 RERGQ96A58 199 aaPredicted RBP16.88■□□□□ 0.29
SMG1-203ENST00000532700 YIPF2Q9BWQ6 316 aa16.88■□□□□ 0.29
SMG1-203ENST00000532700 RAB17Q9H0T7 212 aa16.88■□□□□ 0.29
SMG1-203ENST00000532700 HCN3Q9P1Z3 774 aa16.88■□□□□ 0.29
SMG1-203ENST00000532700 FAM95CA0A1B0GW59 222 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 ZNF860A6NHJ4 632 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 SGK494L7N484 410 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 SLC16A5O15375 505 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 GUCA1CO95843 209 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 C1QAP02745 245 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 ZNF37AP17032 561 aaPredicted RBP16.87■□□□□ 0.29
SMG1-203ENST00000532700 IL2P60568 153 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 MGAT5Q09328 741 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 FRG1Q14331 258 aaKnown RBP16.87■□□□□ 0.29
SMG1-203ENST00000532700 PCOLCEQ15113 449 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 FAM45BPQ6NSW5 357 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 TMEM214Q6NUQ4 689 aaKnown RBP16.87■□□□□ 0.29
SMG1-203ENST00000532700 LCTLQ6UWM7 567 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 IGFL2Q6UWQ7 119 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 STRA8Q7Z7C7 330 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 SLC26A11Q86WA9 606 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 ATCAYQ86WG3 371 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 ZBED8Q8IZ13 594 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 FAM26EQ8N5C1 309 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 EFCAB3Q8N7B9 438 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 OR56A3Q8NH54 315 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 FAM45AQ8TCE6 357 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 NACC2Q96BF6 587 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 LRRC39Q96DD0 335 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 MVB12AQ96EY5 273 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 ARL15Q9NXU5 204 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 WHRNQ9P202 907 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 MAP10Q9P2G4 905 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 G3BP2Q9UN86 482 aaKnown RBP16.87■□□□□ 0.29
SMG1-203ENST00000532700 NOVA2Q9UNW9 492 aaKnown RBP16.87■□□□□ 0.29
SMG1-203ENST00000532700 PCDHGA10Q9Y5H3 936 aa16.87■□□□□ 0.29
SMG1-203ENST00000532700 LRRK2Q5S007 2527 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 KCNE1BA0A087WTH5 132 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 IGHV1-45A0A0A0MS14 117 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 IGHV3-20A0A0C4DH32 117 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 A0A1W2PQ72 361 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 BLACEA4D250 179 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 C4orf51C9J302 202 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 MAP2K7O14733 419 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 VPS4BO75351 444 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 RDH16O75452 317 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 WISP3O95389 354 aaPredicted RBP16.86■□□□□ 0.29
SMG1-203ENST00000532700 HPP00738 406 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 IGHEP01854 428 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 SSTR1P30872 391 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 EMP2P54851 167 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 NR6A1Q15406 480 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 EIF2S3LQ2VIR3 472 aaKnown RBP16.86■□□□□ 0.29
SMG1-203ENST00000532700 GARNL3Q5VVW2 1013 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 LRRC8EQ6NSJ5 796 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 LINC00696Q6ZRV3 163 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 C17orf64Q86WR6 236 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 HPS6Q86YV9 775 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 CATSPER1Q8NEC5 780 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 OR5T3Q8NGG3 340 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 FBXL8Q96CD0 374 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 TSNARE1Q96NA8 513 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 RBCK1Q9BYM8 510 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 TGIF2Q9GZN2 237 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 VN1R1Q9GZP7 353 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 AICDAQ9GZX7 198 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 LHPPQ9H008 270 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 CAB39LQ9H9S4 337 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 ZFATQ9P243 1243 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 VPS4AQ9UN37 437 aa16.86■□□□□ 0.29
SMG1-203ENST00000532700 BMP10O95393 424 aa16.85■□□□□ 0.29
SMG1-203ENST00000532700 F10P00742 488 aa16.85■□□□□ 0.29
SMG1-203ENST00000532700 ALPPP05187 535 aa16.85■□□□□ 0.29
SMG1-203ENST00000532700 PRR35P0CG20 571 aa16.85■□□□□ 0.29
SMG1-203ENST00000532700 CTAGE8P0CG41 777 aa16.85■□□□□ 0.29
SMG1-203ENST00000532700 RPS15AP62244 130 aaKnown RBP16.85■□□□□ 0.29
SMG1-203ENST00000532700 CBLBQ13191 982 aa16.85■□□□□ 0.29
SMG1-203ENST00000532700 FAM53BQ14153 422 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms