RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.96□□□□□ -0.66
PTPRK-221ENST00000532331 LRRC15Q8TF66 581 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 PRR11Q96HE9 360 aaPredicted RBP10.96□□□□□ -0.66
PTPRK-221ENST00000532331 TRNT1Q96Q11 434 aaKnown RBP10.96□□□□□ -0.66
PTPRK-221ENST00000532331 CDK15Q96Q40 435 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 ZNF347Q96SE7 839 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 GPER1Q99527 375 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 OR8D2Q9GZM6 311 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 TBC1D17Q9HA65 648 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 ZNF334Q9HCZ1 680 aaPredicted RBP10.96□□□□□ -0.66
PTPRK-221ENST00000532331 PRTFDC1Q9NRG1 225 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 GPC6Q9Y625 555 aaPredicted RBP10.96□□□□□ -0.66
PTPRK-221ENST00000532331 hCG_2039718K7EN88 272 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 AGPSO00116 658 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 HCN1O60741 890 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 TNFRSF21O75509 655 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 ANGPTL1O95841 491 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 MT-ND1P03886 318 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 NCK1P16333 377 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 CXCR1P25024 350 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 MNDAP41218 407 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 RAB28P51157 221 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 SCAPQ12770 1279 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 PERM1Q5SV97 790 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 CBR4Q8N4T8 237 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 TRIM43Q96BQ3 446 aaPredicted RBP10.96□□□□□ -0.66
PTPRK-221ENST00000532331 PTGES2Q9H7Z7 377 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 RNF121Q9H920 327 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 RMI1Q9H9A7 625 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 LYARQ9NX58 379 aaKnown RBP10.96□□□□□ -0.66
PTPRK-221ENST00000532331 ELOA3DA6NLF2 546 aaPredicted RBP10.95□□□□□ -0.66
PTPRK-221ENST00000532331 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.95□□□□□ -0.66
PTPRK-221ENST00000532331 SHOX2O60902 331 aaPredicted RBP10.95□□□□□ -0.66
PTPRK-221ENST00000532331 GADD45GO95257 159 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 PAX7P23759 505 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 YAP1P46937 504 aaKnown RBP10.95□□□□□ -0.66
PTPRK-221ENST00000532331 ELOA3BQ3SY89 546 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 ZCCHC12Q6PEW1 402 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 GPR149Q86SP6 731 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 CILP2Q8IUL8 1156 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 ELOA3Q8NG57 546 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 RELTQ969Z4 430 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 DEFB126Q9BYW3 111 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 SLC17A6Q9P2U8 582 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 ADAM12O43184 909 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 SMAD4Q13485 552 aaKnown RBP10.95□□□□□ -0.66
PTPRK-221ENST00000532331 SLC5A9Q2M3M2 681 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 SLC30A6Q6NXT4 461 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 ASPGQ86U10 573 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 C1orf52Q8N6N3 182 aaKnown RBP10.95□□□□□ -0.66
PTPRK-221ENST00000532331 MCUBQ9NWR8 336 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 NOX1Q9Y5S8 564 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 TP53I11O14683 189 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 AKAP8O43823 692 aaKnown RBP10.95□□□□□ -0.66
PTPRK-221ENST00000532331 SLC6A11P48066 632 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 ENPP2Q13822 863 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 DEFB133Q30KQ1 61 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 SCD5Q86SK9 330 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 TMEFF1Q8IYR6 380 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 C7orf57Q8NEG2 295 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 MCFD2Q8NI22 146 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 TSEN15Q8WW01 171 aaKnown RBP10.95□□□□□ -0.66
PTPRK-221ENST00000532331 LRTOMTQ8WZ04 291 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 KCNJ9Q92806 393 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 PTCHD1Q96NR3 888 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 SPIN1Q9Y657 262 aaPredicted RBP10.95□□□□□ -0.66
PTPRK-221ENST00000532331 OAS3Q9Y6K5 1087 aaKnown RBP10.95□□□□□ -0.66
PTPRK-221ENST00000532331 ZNF726A6NNF4 738 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 H7BY64 318 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 BCAT2O15382 392 aaPredicted RBP10.95□□□□□ -0.66
PTPRK-221ENST00000532331 MAFKO60675 156 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 PSMA1P25786 263 aaKnown RBP10.95□□□□□ -0.66
PTPRK-221ENST00000532331 ITGB7P26010 798 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 HOXC13P31276 330 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 FAUP35544 74 aaKnown RBP10.95□□□□□ -0.66
PTPRK-221ENST00000532331 ABATP80404 500 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 C6orf52Q5T4I8 152 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 TNFAIP8L2Q6P589 184 aaPredicted RBP10.95□□□□□ -0.66
PTPRK-221ENST00000532331 ARHGAP22Q7Z5H3 698 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 TMEM130Q8N3G9 435 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 OR4C6Q8NH72 309 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 LMO3Q8TAP4 145 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 RNF31Q96EP0 1072 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 PRAP1Q96NZ9 151 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 SLC29A3Q9BZD2 475 aa10.95□□□□□ -0.66
PTPRK-221ENST00000532331 HEMK1Q9Y5R4 338 aaPredicted RBP10.95□□□□□ -0.66
PTPRK-221ENST00000532331 A8MT66 165 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 CREB1P16220 341 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 IL12AP29459 219 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 OTX2P32243 289 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 MTPNP58546 118 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 ACY1Q03154 408 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 OLIG2Q13516 323 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 MYBPC3Q14896 1274 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 SLC9B1Q4ZJI4 515 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 LCN1P1Q5VSP4 162 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 B3GNT9Q6UX72 402 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 WDTC1Q8N5D0 677 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 EDAQ92838 391 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms