RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 PIM1P11309 404 aaPredicted RBP19.84■□□□□ 0.77
CCS-207ENST00000531990 EPB42P16452 691 aa19.84■□□□□ 0.77
CCS-207ENST00000531990 TAC1P20366 129 aa19.84■□□□□ 0.77
CCS-207ENST00000531990 GCGRP47871 477 aa19.84■□□□□ 0.77
CCS-207ENST00000531990 REEP5Q00765 189 aa19.84■□□□□ 0.77
CCS-207ENST00000531990 NDUFA9Q16795 377 aa19.84■□□□□ 0.77
CCS-207ENST00000531990 HKDC1Q2TB90 917 aa19.84■□□□□ 0.77
CCS-207ENST00000531990 PRTGQ2VWP7 1150 aa19.84■□□□□ 0.77
CCS-207ENST00000531990 XKR6Q5GH73 641 aa19.84■□□□□ 0.77
CCS-207ENST00000531990 ZNF517Q6ZMY9 492 aaPredicted RBP19.84■□□□□ 0.77
CCS-207ENST00000531990 SLCO4C1Q6ZQN7 724 aa19.84■□□□□ 0.77
CCS-207ENST00000531990 CYP4X1Q8N118 509 aa19.84■□□□□ 0.77
CCS-207ENST00000531990 KRT78Q8N1N4 520 aa19.84■□□□□ 0.77
CCS-207ENST00000531990 PTGR2Q8N8N7 351 aaPredicted RBP19.84■□□□□ 0.77
CCS-207ENST00000531990 SLC13A3Q8WWT9 602 aa19.84■□□□□ 0.77
CCS-207ENST00000531990 SLC45A3Q96JT2 553 aa19.84■□□□□ 0.77
CCS-207ENST00000531990 EHD1Q9H4M9 534 aa19.84■□□□□ 0.77
CCS-207ENST00000531990 TMEM216Q9P0N5 145 aa19.84■□□□□ 0.77
CCS-207ENST00000531990 WDFY3Q8IZQ1 3526 aa19.84■□□□□ 0.77
CCS-207ENST00000531990 PTPRQQ9UMZ3 2332 aa19.84■□□□□ 0.77
CCS-207ENST00000531990 STX16-NPEPL1H3BU86 382 aa19.83■□□□□ 0.77
CCS-207ENST00000531990 STX16O14662 325 aa19.83■□□□□ 0.77
CCS-207ENST00000531990 LCMT2O60294 686 aaKnown RBP19.83■□□□□ 0.77
CCS-207ENST00000531990 VARSP26640 1264 aaKnown RBP19.83■□□□□ 0.77
CCS-207ENST00000531990 AHRP35869 848 aa19.83■□□□□ 0.77
CCS-207ENST00000531990 CCT5P48643 541 aa19.83■□□□□ 0.77
CCS-207ENST00000531990 PIK3CGP48736 1102 aa19.83■□□□□ 0.77
CCS-207ENST00000531990 MC1RQ01726 317 aa19.83■□□□□ 0.77
CCS-207ENST00000531990 IRF8Q02556 426 aa19.83■□□□□ 0.77
CCS-207ENST00000531990 SLBPQ14493 270 aaKnown RBP eCLIP19.83■□□□□ 0.77
CCS-207ENST00000531990 RBBP5Q15291 538 aaKnown RBP19.83■□□□□ 0.77
CCS-207ENST00000531990 PCBP2Q15366 365 aaKnown RBP eCLIP19.83■□□□□ 0.77
CCS-207ENST00000531990 COL28A1Q2UY09 1125 aa19.83■□□□□ 0.77
CCS-207ENST00000531990 NKAIN1Q4KMZ8 207 aa19.83■□□□□ 0.77
CCS-207ENST00000531990 PAGE2BQ5JRK9 111 aa19.83■□□□□ 0.77
CCS-207ENST00000531990 ZNF385CQ66K41 422 aaPredicted RBP19.83■□□□□ 0.77
CCS-207ENST00000531990 METTL2BQ6P1Q9 378 aaKnown RBP19.83■□□□□ 0.77
CCS-207ENST00000531990 VN1R4Q7Z5H5 301 aa19.83■□□□□ 0.77
CCS-207ENST00000531990 TEX9Q8N6V9 391 aa19.83■□□□□ 0.77
CCS-207ENST00000531990 PITHD1Q9GZP4 211 aaPredicted RBP19.83■□□□□ 0.77
CCS-207ENST00000531990 SYNPO2LQ9H987 977 aa19.83■□□□□ 0.77
CCS-207ENST00000531990 IFT80Q9P2H3 777 aaPredicted RBP19.83■□□□□ 0.77
CCS-207ENST00000531990 IL17BQ9UHF5 180 aa19.83■□□□□ 0.77
CCS-207ENST00000531990 CDC14AQ9UNH5 594 aa19.83■□□□□ 0.77
CCS-207ENST00000531990 ASB1Q9Y576 335 aa19.83■□□□□ 0.77
CCS-207ENST00000531990 PCDHGA6Q9Y5G7 932 aa19.83■□□□□ 0.77
CCS-207ENST00000531990 ZNF891A8MT65 544 aaPredicted RBP19.82■□□□□ 0.76
CCS-207ENST00000531990 K7ENP7 123 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 P2RX6O15547 441 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 STATHP02808 62 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 SERPIND1P05546 499 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 CD63P08962 238 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 RAB40ALP0C0E4 278 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 ATXN8OSP0DMR3 200 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 SCTRP47872 440 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 LAPTM5Q13571 262 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 ARHGAP40Q5TG30 622 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 PRMT9Q6P2P2 845 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 INO80CQ6PI98 192 aaPredicted RBP19.82■□□□□ 0.76
CCS-207ENST00000531990 ZNF740Q8NDX6 193 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 STARD8Q92502 1023 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 PHF21BQ96EK2 531 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 MVB12AQ96EY5 273 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 PTCD3Q96EY7 689 aaKnown RBP19.82■□□□□ 0.76
CCS-207ENST00000531990 EFCAB11Q9BUY7 163 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 TMEM109Q9BVC6 243 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 SPNS1Q9H2V7 528 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 GEMIN8Q9NWZ8 242 aaKnown RBP19.82■□□□□ 0.76
CCS-207ENST00000531990 LGALS13Q9UHV8 139 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 ZFP69BQ9UJL9 534 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 FARSAQ9Y285 508 aaKnown RBP19.82■□□□□ 0.76
CCS-207ENST00000531990 PADI2Q9Y2J8 665 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 KMT2BQ9UMN6 2715 aaPredicted RBP19.82■□□□□ 0.76
CCS-207ENST00000531990 FER1L5A0AVI2 2057 aa19.82■□□□□ 0.76
CCS-207ENST00000531990 CCDC151A5D8V7 595 aa19.81■□□□□ 0.76
CCS-207ENST00000531990 FOXO6A8MYZ6 492 aa19.81■□□□□ 0.76
CCS-207ENST00000531990 COPEO14579 308 aa19.81■□□□□ 0.76
CCS-207ENST00000531990 TERTO14746 1132 aaKnown RBP19.81■□□□□ 0.76
CCS-207ENST00000531990 PRPF4O43172 522 aaKnown RBP eCLIP19.81■□□□□ 0.767e-7■■■■□ 22.1
CCS-207ENST00000531990 NDUFS4O43181 175 aa19.81■□□□□ 0.76
CCS-207ENST00000531990 F8A1P23610 371 aa19.81■□□□□ 0.76
CCS-207ENST00000531990 PTPN4P29074 926 aa19.81■□□□□ 0.76
CCS-207ENST00000531990 EEF1DP29692 281 aaKnown RBP19.81■□□□□ 0.76
CCS-207ENST00000531990 RGS1Q08116 209 aa19.81■□□□□ 0.76
CCS-207ENST00000531990 CHIT1Q13231 466 aa19.81■□□□□ 0.76
CCS-207ENST00000531990 PWP1Q13610 501 aa19.81■□□□□ 0.76
CCS-207ENST00000531990 COL9A2Q14055 689 aaPredicted RBP19.81■□□□□ 0.76
CCS-207ENST00000531990 DOC2AQ14183 400 aa19.81■□□□□ 0.76
CCS-207ENST00000531990 NCF4Q15080 339 aa19.81■□□□□ 0.76
CCS-207ENST00000531990 HIST2H2ACQ16777 129 aaPredicted RBP19.81■□□□□ 0.76
CCS-207ENST00000531990 MLIPQ5VWP3 458 aa19.81■□□□□ 0.76
CCS-207ENST00000531990 HIST2H2AA3Q6FI13 130 aa19.81■□□□□ 0.76
CCS-207ENST00000531990 LCN10Q6JVE6 187 aa19.81■□□□□ 0.76
CCS-207ENST00000531990 C16orf46Q6P387 395 aa19.81■□□□□ 0.76
CCS-207ENST00000531990 FAM198BQ6UWH4 519 aa19.81■□□□□ 0.76
CCS-207ENST00000531990 TMIGD1Q6UXZ0 262 aa19.81■□□□□ 0.76
CCS-207ENST00000531990 METTL27Q8N6F8 245 aaPredicted RBP19.81■□□□□ 0.76
CCS-207ENST00000531990 ENDOVQ8N8Q3 282 aaKnown RBP19.81■□□□□ 0.76
CCS-207ENST00000531990 TRPV3Q8NET8 790 aa19.81■□□□□ 0.76
CCS-207ENST00000531990 TTLQ8NG68 377 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms