RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 OR2L8Q8NGY9 312 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 METTL21AQ8WXB1 218 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 ELMO1Q92556 727 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 SLCO2A1Q92959 643 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 MMABQ96EY8 250 aaPredicted RBP7.72□□□□□ -1.17
CD44-232ENST00000531118 FSD1LQ9BXM9 530 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 RBCK1Q9BYM8 510 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 ATG10Q9H0Y0 220 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 HAUS4Q9H6D7 363 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 MMP25Q9NPA2 562 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 PNPLA3Q9NST1 481 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 Q9UFV3 132 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 DCTN4Q9UJW0 460 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 CDC14AQ9UNH5 594 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 KLF13Q9Y2Y9 288 aaPredicted RBP7.72□□□□□ -1.17
CD44-232ENST00000531118 SCN3AQ9NY46 2000 aa7.71□□□□□ -1.17
CD44-232ENST00000531118 SLC5A10A0PJK1 596 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 TRIM64A6NGJ6 449 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 TRIM64BA6NI03 449 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 LRRC53A6NM62 1247 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 C2orf81A6NN90 581 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 TARM1B6A8C7 271 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 CCL22O00626 93 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 APOL1O14791 398 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 ARHGEF9O43307 516 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 AP2A2O94973 939 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 CYC1P08574 325 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 PRSS56P0CW18 603 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 GLI4P10075 376 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 CD9P21926 228 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 ACVR2AP27037 513 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 TPP2P29144 1249 aaPredicted RBP7.71□□□□□ -1.18
CD44-232ENST00000531118 UQCRC1P31930 480 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 MC4RP32245 332 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 CDKN1CP49918 316 aaPredicted RBP7.71□□□□□ -1.18
CD44-232ENST00000531118 NR0B1P51843 470 aaKnown RBP7.71□□□□□ -1.18
CD44-232ENST00000531118 ITGA8P53708 1063 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 TAS2R40P59535 323 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 TAS2R50P59544 299 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 MPP3Q13368 585 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 DAZAP2Q15038 168 aaPredicted RBP7.71□□□□□ -1.18
CD44-232ENST00000531118 SF1Q15637 639 aaKnown RBP7.71□□□□□ -1.18
CD44-232ENST00000531118 EXT1Q16394 746 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 B3GNT6Q6ZMB0 384 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 ANKRD37Q7Z713 158 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 SERPINA9Q86WD7 417 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 P3H2Q8IVL5 708 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 DCUN1D3Q8IWE4 304 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 CLDN19Q8N6F1 224 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 M1APQ8TC57 530 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.71□□□□□ -1.18
CD44-232ENST00000531118 RNF157Q96PX1 679 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 ERGIC2Q96RQ1 377 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 MIPEPQ99797 713 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 SH3GL2Q99962 352 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 ZFYVE21Q9BQ24 234 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 TTYH2Q9BSA4 534 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 ISCUQ9H1K1 167 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 SYNPO2LQ9H987 977 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 FRRS1LQ9P0K9 344 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 RUVBL1Q9Y265 456 aaKnown RBP7.71□□□□□ -1.18
CD44-232ENST00000531118 KLK4Q9Y5K2 254 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 PRSS21Q9Y6M0 314 aa7.71□□□□□ -1.18
CD44-232ENST00000531118 EML6Q6ZMW3 1958 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 CR1P17927 2039 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 A0A0A6YYC8 382 aaPredicted RBP7.7□□□□□ -1.18
CD44-232ENST00000531118 A0A0U1RQJ8 604 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 LRRD1A4D1F6 860 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 OR2A25A4D2G3 310 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 NPIPA2E9PIF3 369 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 NPIPA3F8WFD2 350 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 I3L1I5 382 aaPredicted RBP7.7□□□□□ -1.18
CD44-232ENST00000531118 FOXS1O43638 330 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 FTH1P02794 183 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 CYB561P49447 251 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 ASCL1P50553 236 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 WASHC5Q12768 1159 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 HYAL2Q12891 473 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 HKDC1Q2TB90 917 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 GPR33Q49SQ1 333 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 MINDY4Q4G0A6 757 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 DNAJC21Q5F1R6 531 aaKnown RBP7.7□□□□□ -1.18
CD44-232ENST00000531118 MFSD4BQ5TF39 518 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 KAZNQ674X7 775 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 RTL6Q6ICC9 239 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 HMBOX1Q6NT76 420 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 PAPD4Q6PIY7 484 aaKnown RBP7.7□□□□□ -1.18
CD44-232ENST00000531118 LRRC75A-AS1Q8N1F1 130 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 ARHGEF39Q8N4T4 335 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 CSNK1A1LQ8N752 337 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 RELL2Q8NC24 303 aaPredicted RBP7.7□□□□□ -1.18
CD44-232ENST00000531118 OR2L3Q8NG85 312 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 OR52N2Q8NGI0 321 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 OR5M9Q8NGP3 310 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 C16orf52Q8NHV5 167 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 TMEM158Q8WZ71 300 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 RAPGEF5Q92565 580 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 ZUFSPQ96AP4 578 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 TMEM125Q96AQ2 219 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 DMRTB1Q96MA1 342 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms