RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 ZNF782Q6ZMW2 699 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-227ENST00000530748 ZNF227Q86WZ6 799 aa8.24□□□□□ -1.09
CTNND1-227ENST00000530748 ZC3H3Q8IXZ2 948 aaKnown RBP8.24□□□□□ -1.09
CTNND1-227ENST00000530748 SDR16C5Q8N3Y7 309 aa8.24□□□□□ -1.09
CTNND1-227ENST00000530748 OR2T29Q8NH02 315 aa8.24□□□□□ -1.09
CTNND1-227ENST00000530748 KIAA1191Q96A73 305 aa8.24□□□□□ -1.09
CTNND1-227ENST00000530748 POLR2J2Q9GZM3 115 aaKnown RBP8.24□□□□□ -1.09
CTNND1-227ENST00000530748 SLC22A4Q9H015 551 aa8.24□□□□□ -1.09
CTNND1-227ENST00000530748 ZBTB26Q9HCK0 441 aa8.24□□□□□ -1.09
CTNND1-227ENST00000530748 DZANK1Q9NVP4 752 aa8.24□□□□□ -1.09
CTNND1-227ENST00000530748 TNFRSF10DQ9UBN6 386 aa8.24□□□□□ -1.09
CTNND1-227ENST00000530748 WNT6Q9Y6F9 365 aa8.24□□□□□ -1.09
CTNND1-227ENST00000530748 HCRTO43612 131 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 DBIP07108 87 aaKnown RBP8.23□□□□□ -1.09
CTNND1-227ENST00000530748 HOXB2P14652 356 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 CD36P16671 472 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 GJA1P17302 382 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 UQCRC2P22695 453 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 ZNF41P51814 821 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-227ENST00000530748 PCLAFQ15004 111 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 TCEAL1Q15170 157 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 CNPY1Q3B7I2 92 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 PRRT3Q5FWE3 981 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 RBM20Q5T481 1227 aaKnown RBP8.23□□□□□ -1.09
CTNND1-227ENST00000530748 ULK3Q6PHR2 472 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 GRASPQ7Z6J2 395 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-227ENST00000530748 DCUN1D3Q8IWE4 304 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 OR4E2Q8NGC2 313 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 ARMC5Q96C12 935 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 HSH2DQ96JZ2 352 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 SCGB3A2Q96PL1 93 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 OR52B2Q96RD2 323 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 MOV10Q9HCE1 1003 aaKnown RBP8.23□□□□□ -1.09
CTNND1-227ENST00000530748 FKBP14Q9NWM8 211 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 FBXO9Q9UK97 447 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-227ENST00000530748 CFAP20Q9Y6A4 193 aaKnown RBP8.23□□□□□ -1.09
CTNND1-227ENST00000530748 STYXL1Q9Y6J8 313 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 LTBP3Q9NS15 1303 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 ACOX3O15254 700 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 F2P00734 622 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 CREB1P16220 341 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 APLP1P51693 650 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 CCNHP51946 323 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-227ENST00000530748 ADAM8P78325 824 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 ST3GAL3Q11203 375 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 TMEM17Q86X19 198 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 ZSCAN1Q8NBB4 408 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 C15orf40Q8WUR7 153 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 STON2Q8WXE9 905 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 PEBP4Q96S96 227 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 B3GNT4Q9C0J1 378 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 SLC2A4RGQ9NR83 387 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 TMEM59LQ9UK28 342 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 OARD1Q9Y530 152 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 NEMP2A6NFY4 417 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 TMEM233B4DJY2 109 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 PSKH1P11801 424 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 EMX2Q04743 252 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 MADCAM1Q13477 382 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 GRM2Q14416 872 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 DSC3Q14574 896 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 ZNF630Q2M218 657 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-227ENST00000530748 NPAS3Q8IXF0 933 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 Q8N9G6 341 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-227ENST00000530748 OR4K17Q8NGC6 315 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 C1orf216Q8TAB5 229 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 CPNE2Q96FN4 548 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-227ENST00000530748 TMEM80Q96HE8 168 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 RANBP9Q96S59 729 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 ORAI3Q9BRQ5 295 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 TM9SF3Q9HD45 589 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 BRD7Q9NPI1 651 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 COMMD3Q9UBI1 195 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 CACNA1FO60840 1977 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 H3BUI4 141 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 TBX1O43435 398 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 C6orf47O95873 294 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 ACRV1P26436 265 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 CDKN1CP49918 316 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-227ENST00000530748 CDK6Q00534 326 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 FIP1L1Q6UN15 594 aaKnown RBP8.23□□□□□ -1.09
CTNND1-227ENST00000530748 CEACAM20Q6UY09 585 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 PQLC3Q8N755 202 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 ZNF676Q8N7Q3 588 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 AQP11Q8NBQ7 271 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 OSBPL7Q9BZF2 842 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 BCAS3Q9H6U6 928 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 TRIM36Q9NQ86 728 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 CTPS2Q9NRF8 586 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 GRHPRQ9UBQ7 328 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 AASSQ9UDR5 926 aa8.23□□□□□ -1.09
CTNND1-227ENST00000530748 LCHNA4D1U4 455 aa8.22□□□□□ -1.09
CTNND1-227ENST00000530748 JUNP05412 331 aaKnown RBP8.22□□□□□ -1.09
CTNND1-227ENST00000530748 HEXBP07686 556 aa8.22□□□□□ -1.09
CTNND1-227ENST00000530748 GP1BBP13224 206 aa8.22□□□□□ -1.09
CTNND1-227ENST00000530748 AZGP1P25311 298 aaKnown RBP8.22□□□□□ -1.09
CTNND1-227ENST00000530748 BMP8BP34820 402 aa8.22□□□□□ -1.09
CTNND1-227ENST00000530748 TMEM198Q66K66 360 aa8.22□□□□□ -1.09
CTNND1-227ENST00000530748 BMP8AQ7Z5Y6 402 aa8.22□□□□□ -1.09
CTNND1-227ENST00000530748 TRAM1L1Q8N609 369 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms