RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 UBE2CO00762 179 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 TFECO14948 347 aaPredicted RBP2.35□□□□□ -2.03
NUP98-218ENST00000530516 RPS6KA5O75582 802 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 SERPING1P05155 500 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 HOXD4P09016 255 aaPredicted RBP2.35□□□□□ -2.03
NUP98-218ENST00000530516 PRKAR1AP10644 381 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 F3P13726 295 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 EDNRAP25101 427 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 CAPZA2P47755 286 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 DLK1P80370 383 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 PTGISQ16647 500 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 LACTB2Q53H82 288 aaPredicted RBP2.35□□□□□ -2.03
NUP98-218ENST00000530516 SPECC1Q5M775 1068 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 ARMC4Q5T2S8 1044 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 NAA16Q6N069 864 aaPredicted RBP2.35□□□□□ -2.03
NUP98-218ENST00000530516 CTR9Q6PD62 1173 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 C3P1Q6ZMU1 363 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 Q6ZR54 194 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 FAM131BQ86XD5 332 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 HPS6Q86YV9 775 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 KCTD6Q8NC69 237 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 METTL21AQ8WXB1 218 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 SLF1Q9BQI6 1058 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 CENPOQ9BU64 300 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 FZD8Q9H461 694 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 ACTL8Q9H568 366 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 PHPT1Q9NRX4 125 aaPredicted RBP2.35□□□□□ -2.03
NUP98-218ENST00000530516 TXNDC16Q9P2K2 825 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 NEDD4P46934 1319 aa2.35□□□□□ -2.03
NUP98-218ENST00000530516 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.34□□□□□ -2.03
NUP98-218ENST00000530516 RTCAO00442 366 aaKnown RBP2.34□□□□□ -2.03
NUP98-218ENST00000530516 SURF4O15260 269 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 LRCH4O75427 683 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 HPRP00739 348 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 FYNP06241 537 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 KRTAP1-4P0C5Y4 121 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 ITIH1P19827 911 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 RAB28P51157 221 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 DHODHQ02127 395 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 ZFP36L1Q07352 338 aaKnown RBP2.34□□□□□ -2.03
NUP98-218ENST00000530516 SGCGQ13326 291 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 ZNF177Q13360 481 aaPredicted RBP2.34□□□□□ -2.03
NUP98-218ENST00000530516 PEX6Q13608 980 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 SLC25A30Q5SVS4 291 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 CFAP58Q5T655 872 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 CYB5D1Q6P9G0 228 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 LCLAT1Q6UWP7 414 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 RYBPQ8N488 228 aaPredicted RBP2.34□□□□□ -2.03
NUP98-218ENST00000530516 TTC30BQ8N4P2 665 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 TSACCQ96A04 125 aaPredicted RBP2.34□□□□□ -2.03
NUP98-218ENST00000530516 HDAC11Q96DB2 347 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 NEDD4LQ96PU5 975 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 PUS3Q9BZE2 481 aaKnown RBP2.34□□□□□ -2.03
NUP98-218ENST00000530516 SDCBP2Q9H190 292 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 TUBB1Q9H4B7 451 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 ST6GALNAC4Q9H4F1 302 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 ANKEF1Q9NU02 776 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 TBC1D13Q9NVG8 400 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.34□□□□□ -2.03
NUP98-218ENST00000530516 LNPEPQ9UIQ6 1025 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 PILRBQ9UKJ0 227 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 RARRES3Q9UL19 164 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 KLF2Q9Y5W3 355 aaPredicted RBP2.34□□□□□ -2.03
NUP98-218ENST00000530516 SELENOKQ9Y6D0 94 aa2.34□□□□□ -2.03
NUP98-218ENST00000530516 MYH14Q7Z406 1995 aaKnown RBP2.34□□□□□ -2.04
NUP98-218ENST00000530516 ABCA7Q8IZY2 2146 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 IGLV4-3A0A075B6K6 122 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 C17orf105B2RV13 164 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 SHISA9B4DS77 424 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 RTL8CO15255 209 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 CYTIPO60759 359 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 DIAPH2O60879 1101 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 SAP30O75446 220 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 MYBL1P10243 752 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 TCF4P15884 667 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 AADACP22760 399 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 EEF1B2P24534 225 aaKnown RBP2.33□□□□□ -2.04
NUP98-218ENST00000530516 RAD52P43351 418 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 PRELPP51888 382 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 AIMP1Q12904 312 aaKnown RBP2.33□□□□□ -2.04
NUP98-218ENST00000530516 ILF2Q12905 390 aaKnown RBP2.33□□□□□ -2.04
NUP98-218ENST00000530516 KYNUQ16719 465 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 TMEM266Q2M3C6 531 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 LBHQ53QV2 105 aaPredicted RBP2.33□□□□□ -2.04
NUP98-218ENST00000530516 KRT39Q6A163 491 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 ZNF841Q6ZN19 808 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
NUP98-218ENST00000530516 CHMP1BQ7LBR1 199 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 CCDC60Q8IWA6 550 aaPredicted RBP2.33□□□□□ -2.04
NUP98-218ENST00000530516 PHC2Q8IXK0 858 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 SLC39A11Q8N1S5 342 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 TCEANCQ8N8B7 351 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 OR10G7Q8NGN6 311 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 SSC4DQ8WTU2 575 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 NPRL2Q8WTW4 380 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 ZNF597Q96LX8 424 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 C1orf147Q96MC9 270 aaPredicted RBP2.33□□□□□ -2.04
NUP98-218ENST00000530516 CFAP57Q96MR6 1250 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 ZNF558Q96NG5 402 aa2.33□□□□□ -2.04
NUP98-218ENST00000530516 BTBD9Q96Q07 612 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms