RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 SF1Q15637 639 aaKnown RBP6.75□□□□□ -1.33
ITGB1-218ENST00000528877 KCTD19Q17RG1 926 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-218ENST00000528877 KLHL38Q2WGJ6 581 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 ACSBG2Q5FVE4 666 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 MED25Q71SY5 747 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 CBLL1Q75N03 491 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 FAM214BQ7L5A3 538 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 UBE3DQ7Z6J8 389 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 KCNMB4Q86W47 210 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 RAB43Q86YS6 212 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 MCATQ8IVS2 390 aaKnown RBP6.75□□□□□ -1.33
ITGB1-218ENST00000528877 MRPL41Q8IXM3 137 aaKnown RBP6.75□□□□□ -1.33
ITGB1-218ENST00000528877 ARHGEF39Q8N4T4 335 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 ZNF655Q8N720 491 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-218ENST00000528877 OR9A1PQ8NGU1 263 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 CFAP61Q8NHU2 1237 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 GABPB2Q8TAK5 448 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-218ENST00000528877 SKA2Q8WVK7 121 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-218ENST00000528877 SMPDL3AQ92484 453 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 EBNA1BP2Q99848 306 aaKnown RBP6.75□□□□□ -1.33
ITGB1-218ENST00000528877 SELENOSQ9BQE4 189 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 WDR83Q9BRX9 315 aaKnown RBP6.75□□□□□ -1.33
ITGB1-218ENST00000528877 AARSD1Q9BTE6 412 aaKnown RBP6.75□□□□□ -1.33
ITGB1-218ENST00000528877 NDC1Q9BTX1 674 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 KRTAP17-1Q9BYP8 105 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 TRIM55Q9BYV6 548 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 SPRTNQ9H040 489 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-218ENST00000528877 DDX47Q9H0S4 455 aaKnown RBP6.75□□□□□ -1.33
ITGB1-218ENST00000528877 ING2Q9H160 280 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 CLMPQ9H6B4 373 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 PLAC1Q9HBJ0 212 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 SLC6A20Q9NP91 592 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 FBXO6Q9NRD1 293 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-218ENST00000528877 C20orf96Q9NUD7 363 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-218ENST00000528877 TXLNGQ9NUQ3 528 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 IL1RAPL1Q9NZN1 696 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 GALPQ9UBC7 116 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 ASIC3Q9UHC3 531 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 TLK1Q9UKI8 766 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 NXT1Q9UKK6 140 aaKnown RBP6.75□□□□□ -1.33
ITGB1-218ENST00000528877 FBXO5Q9UKT4 447 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 CORO1CQ9ULV4 474 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-218ENST00000528877 CRYL1Q9Y2S2 319 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 DHRS7Q9Y394 339 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 NBASA2RRP1 2371 aa6.75□□□□□ -1.33
ITGB1-218ENST00000528877 SEC16AO15027 2179 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 IGLV3-12A0A075B6K2 115 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 IGKV1-8A0A0C4DH67 115 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 CTAGE9A4FU28 777 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 CLEC18AA5D8T8 446 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 KRT87PA6NCN2 255 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 VSTM2BA6NLU5 285 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 E7ENX8 843 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 K7EM74 188 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 NDC80O14777 642 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 VPS26AO75436 327 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 SORBS2O94875 1100 aaKnown RBP6.74□□□□□ -1.33
ITGB1-218ENST00000528877 SEC31AO94979 1220 aaKnown RBP6.74□□□□□ -1.33
ITGB1-218ENST00000528877 CCNDBP1O95273 360 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 SLC16A8O95907 504 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 PGRP06401 933 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 UMODP07911 640 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 FUT4P22083 530 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 CMPK1P30085 196 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 FOLR3P41439 243 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 PGDP52209 483 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 PNLIPRP1P54315 467 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 SOX8P57073 446 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 ABATP80404 500 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 TIAL1Q01085 375 aaKnown RBP eCLIP6.74□□□□□ -1.33
ITGB1-218ENST00000528877 DR1Q01658 176 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 TAP2Q03519 686 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 CTBP1Q13363 440 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 ATP1A4Q13733 1029 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 SSPNQ14714 243 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 PRTGQ2VWP7 1150 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 SPANXN3Q5MJ09 141 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 SFRP5Q5T4F7 317 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 SLC6A19Q695T7 634 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 ZNF425Q6IV72 752 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 HIBCHQ6NVY1 386 aaPredicted RBP6.74□□□□□ -1.33
ITGB1-218ENST00000528877 FIGLAQ6QHK4 219 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 CLEC18BQ6UXF7 455 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 ASB18Q6ZVZ8 466 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 COX15Q7KZN9 410 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 PPP1R32Q7Z5V6 425 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 TAX1BP1Q86VP1 789 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 PAQR7Q86WK9 346 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 LRRC56Q8IYG6 542 aaPredicted RBP6.74□□□□□ -1.33
ITGB1-218ENST00000528877 TTC29Q8NA56 475 aaPredicted RBP6.74□□□□□ -1.33
ITGB1-218ENST00000528877 CLEC18CQ8NCF0 446 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 ZNF480Q8WV37 535 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 INPP5DQ92835 1189 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 FAM136AQ96C01 138 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 MVB12AQ96EY5 273 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 CERS2Q96G23 380 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 C10orf90Q96M02 699 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 GPR21Q99679 349 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 SMAD5Q99717 465 aaKnown RBP6.74□□□□□ -1.33
ITGB1-218ENST00000528877 NAPGQ99747 312 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms