RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 E7ENX8 843 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 SMAPO00193 183 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 DNALI1O14645 258 aaPredicted RBP9.99□□□□□ -0.81
CPSF1-203ENST00000527916 ZBTB14O43829 449 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 HAUS5O94927 633 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 CCNDBP1O95273 360 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 SLC16A8O95907 504 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 PGAM1P18669 254 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 IVDP26440 423 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 PSMB5P28074 263 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 SOX11P35716 441 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 SLC1A2P43004 574 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 PNLIPRP1P54315 467 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 VSX2P58304 361 aaPredicted RBP9.99□□□□□ -0.81
CPSF1-203ENST00000527916 AP2B1P63010 937 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 CSNK1G2P78368 415 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 ABATP80404 500 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 TAP2Q03519 686 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 OCA2Q04671 838 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 PTK6Q13882 451 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 C3AR1Q16581 482 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 PRTGQ2VWP7 1150 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 FRMPD2BQ6IN97 320 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 ZNF425Q6IV72 752 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 SYDE1Q6ZW31 735 aaPredicted RBP9.99□□□□□ -0.81
CPSF1-203ENST00000527916 NDUFAF7Q7L592 441 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 GALNT7Q86SF2 657 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 PAQR7Q86WK9 346 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 C2CD4AQ8NCU7 369 aaPredicted RBP9.99□□□□□ -0.81
CPSF1-203ENST00000527916 CHDHQ8NE62 594 aaPredicted RBP9.99□□□□□ -0.81
CPSF1-203ENST00000527916 GIMAP7Q8NHV1 300 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 BRIX1Q8TDN6 353 aaKnown RBP9.99□□□□□ -0.81
CPSF1-203ENST00000527916 ADAMTS18Q8TE60 1221 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 FAM136AQ96C01 138 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 MVB12AQ96EY5 273 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 RUNDC3BQ96NL0 473 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 SLC30A3Q99726 388 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 EBNA1BP2Q99848 306 aaKnown RBP9.99□□□□□ -0.81
CPSF1-203ENST00000527916 PLCD4Q9BRC7 762 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 AARSD1Q9BTE6 412 aaKnown RBP9.99□□□□□ -0.81
CPSF1-203ENST00000527916 DPH7Q9BTV6 452 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 ENKD1Q9H0I2 346 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 KCNF1Q9H3M0 494 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 ZNF304Q9HCX3 659 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 MRPS30Q9NP92 439 aaKnown RBP9.99□□□□□ -0.81
CPSF1-203ENST00000527916 FBXO6Q9NRD1 293 aaPredicted RBP9.99□□□□□ -0.81
CPSF1-203ENST00000527916 CTSFQ9UBX1 484 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 TINAGQ9UJW2 476 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 IGLV3-12A0A075B6K2 115 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 LOC105369274A0A096LPK9 316 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 IGKV1-8A0A0C4DH67 115 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 LOC102723532A0A0G2JNH3 316 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 A0A0J9YVX5 310 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 KRT87PA6NCN2 255 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 TXNDC9O14530 226 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 PRAMEF2O60811 474 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 VPS26AO75436 327 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 WFS1O76024 890 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 BMP10O95393 424 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 SERPINA7P05543 415 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 PRR35P0CG20 571 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 HRH2P25021 359 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 MCM3P25205 808 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 RPA3P35244 121 aaPredicted RBP9.98□□□□□ -0.81
CPSF1-203ENST00000527916 PPP2R2AP63151 447 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 MUM1Q2TAK8 710 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 KRTCAP3Q53RY4 240 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 HSP90AA5PQ58FG0 334 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 SPANXN3Q5MJ09 141 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 GARNL3Q5VVW2 1013 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 ICE2Q659A1 982 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 SUSD1Q6UWL2 747 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 RIPOR1Q6ZS17 1223 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 KIAA0408Q6ZU52 694 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 COX15Q7KZN9 410 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 CNTN4Q8IWV2 1026 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 OR4N4Q8N0Y3 316 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 EID3Q8N140 333 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 SIRT6Q8N6T7 355 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 CD200R1Q8TD46 325 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 CA5BP1Q8WTZ4 195 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 ZNF480Q8WV37 535 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 PSMF1Q92530 271 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 GPR21Q99679 349 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 RNF32Q9H0A6 362 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 DDX47Q9H0S4 455 aaKnown RBP9.98□□□□□ -0.81
CPSF1-203ENST00000527916 IARS2Q9NSE4 1012 aaKnown RBP9.98□□□□□ -0.81
CPSF1-203ENST00000527916 TRMT1Q9NXH9 659 aaKnown RBP9.98□□□□□ -0.81
CPSF1-203ENST00000527916 TAS2R13Q9NYV9 303 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 ZC3H7BQ9UGR2 993 aaKnown RBP9.98□□□□□ -0.81
CPSF1-203ENST00000527916 ASIC3Q9UHC3 531 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 CDC14AQ9UNH5 594 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 MEMO1Q9Y316 297 aa9.98□□□□□ -0.81
CPSF1-203ENST00000527916 FLNAP21333 2647 aaKnown RBP9.98□□□□□ -0.81
CPSF1-203ENST00000527916 JMJD1CQ15652 2540 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 FOXO6A8MYZ6 492 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 H0YGG7 62 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 SLC16A5O15375 505 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 WDPCPO95876 746 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 F10P00742 488 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms