RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 FRG1Q14331 258 aaKnown RBP13.47□□□□□ -0.25
CAPN1-212ENST00000527887 ZNF169Q14929 603 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-212ENST00000527887 NR6A1Q15406 480 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 HIF1AQ16665 826 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 C8orf74Q6P047 294 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 AGTRAPQ6RW13 159 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 PAQR3Q6TCH7 311 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 TMEM205Q6UW68 189 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 LAPTM4BQ86VI4 370 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 PRSS58Q8IYP2 241 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 AMER3Q8N944 861 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 CAMKVQ8NCB2 501 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 ST6GALNAC3Q8NDV1 305 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 PRR7Q8TB68 274 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 ATL1Q8WXF7 558 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 CERS2Q96G23 380 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 DDX47Q9H0S4 455 aaKnown RBP13.47□□□□□ -0.25
CAPN1-212ENST00000527887 ANKZF1Q9H8Y5 726 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 ANKRD12Q6UB98 2062 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 IGHV1-45A0A0A0MS14 117 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 A0A0A6YYC8 382 aaPredicted RBP13.46□□□□□ -0.25
CAPN1-212ENST00000527887 DYTNA2CJ06 578 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 ANKUB1A6NFN9 424 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 WIPF3A6NGB9 483 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 I3L1I5 382 aaPredicted RBP13.46□□□□□ -0.25
CAPN1-212ENST00000527887 NDC80O14777 642 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 SEMA7AO75326 666 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 PRR35P0CG20 571 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 MYBL2P10244 700 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 COX6A1P12074 109 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 H2AFXP16104 143 aaPredicted RBP13.46□□□□□ -0.25
CAPN1-212ENST00000527887 IL10P22301 178 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 IVDP26440 423 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 GABRB3P28472 473 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 CSNK1G2P78368 415 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 TIAL1Q01085 375 aaKnown RBP eCLIP13.46□□□□□ -0.25
CAPN1-212ENST00000527887 C2orf54Q08AI8 447 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 BBS9Q3SYG4 887 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 TEDDM1Q5T9Z0 273 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 DUPD1Q68J44 220 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 CAPN13Q6MZZ7 669 aaPredicted RBP13.46□□□□□ -0.25
CAPN1-212ENST00000527887 LCTLQ6UWM7 567 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 METTL21AQ8WXB1 218 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 HAS2Q92819 552 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 C8orf44Q96CB5 159 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 TM4SF19Q96DZ7 209 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 PDLIM5Q96HC4 596 aaKnown RBP13.46□□□□□ -0.25
CAPN1-212ENST00000527887 NDNQ99608 321 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 LRRC1Q9BTT6 524 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 TUBB6Q9BUF5 446 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 SARGQ9BW04 601 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 SGPP1Q9BX95 441 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 PARD6BQ9BYG5 372 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 ZNF700Q9H0M5 742 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 SYNPO2LQ9H987 977 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 ABCF3Q9NUQ8 709 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 C19orf25Q9UFG5 118 aaPredicted RBP13.46□□□□□ -0.25
CAPN1-212ENST00000527887 MKL2Q9ULH7 1088 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 SLC5A6Q9Y289 635 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 VWA7Q9Y334 891 aa13.46□□□□□ -0.25
CAPN1-212ENST00000527887 SPTBN1Q01082 2364 aaKnown RBP13.45□□□□□ -0.26
CAPN1-212ENST00000527887 ALOX12BO75342 701 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 ERLIN1O75477 346 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 WFS1O76024 890 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 F7P08709 466 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-212ENST00000527887 ENO2P09104 434 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-212ENST00000527887 SOX11P35716 441 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 CDKN2DP55273 166 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 CDC16Q13042 620 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 PDAP1Q13442 181 aaKnown RBP13.45□□□□□ -0.26
CAPN1-212ENST00000527887 NAE1Q13564 534 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 INAQ16352 499 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 MSS51Q4VC12 460 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 FAM45BPQ6NSW5 357 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 TMEM214Q6NUQ4 689 aaKnown RBP13.45□□□□□ -0.26
CAPN1-212ENST00000527887 NIPAL1Q6NVV3 410 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 VN1R4Q7Z5H5 301 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 ZC3H7AQ8IWR0 971 aaKnown RBP13.45□□□□□ -0.26
CAPN1-212ENST00000527887 IFT20Q8IY31 132 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 TBC1D19Q8N5T2 526 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 ABHD11Q8NFV4 315 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 FAM45AQ8TCE6 357 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 FAR1Q8WVX9 515 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 LINGO1Q96FE5 620 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 KRT12Q99456 494 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 RNF32Q9H0A6 362 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 PPANQ9NQ55 473 aaKnown RBP13.45□□□□□ -0.26
CAPN1-212ENST00000527887 PLEKHB1Q9UF11 243 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-212ENST00000527887 TEKT2Q9UIF3 430 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 ADAMTS6Q9UKP5 1117 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 MRPS2Q9Y399 296 aaKnown RBP13.45□□□□□ -0.26
CAPN1-212ENST00000527887 SLC22A7Q9Y694 548 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 ESPL1Q14674 2120 aa13.45□□□□□ -0.26
CAPN1-212ENST00000527887 UNC79Q9P2D8 2635 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 SHANK1Q9Y566 2161 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 TRAV17A0A0B4J275 112 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 P2RX6O15547 441 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 KLHL18O94889 574 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 RHOXF2BP0C7M4 288 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 SLC35G6P0C7Q6 338 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms