RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 XKRXQ6PP77 449 aa22.26■■□□□ 1.15
CPSF1-202ENST00000527827 ASB11Q8WXH4 323 aa22.26■■□□□ 1.15
CPSF1-202ENST00000527827 ZNF354BQ96LW1 612 aa22.26■■□□□ 1.15
CPSF1-202ENST00000527827 SIGLEC12Q96PQ1 595 aa22.26■■□□□ 1.15
CPSF1-202ENST00000527827 EBNA1BP2Q99848 306 aaKnown RBP22.26■■□□□ 1.15
CPSF1-202ENST00000527827 TRIM8Q9BZR9 551 aa22.26■■□□□ 1.15
CPSF1-202ENST00000527827 RBSNQ9H1K0 784 aa22.26■■□□□ 1.15
CPSF1-202ENST00000527827 C2CD3Q4AC94 2353 aa22.26■■□□□ 1.15
CPSF1-202ENST00000527827 CELSR1Q9NYQ6 3014 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 SYF2O95926 243 aaKnown RBP22.25■■□□□ 1.15
CPSF1-202ENST00000527827 SKIV2L2P42285 1042 aaKnown RBP22.25■■□□□ 1.15
CPSF1-202ENST00000527827 KCNJ1P48048 391 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 CUL1Q13616 776 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 TUBA3CQ13748 450 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 MINDY4Q4G0A6 757 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 MFSD4BQ5TF39 518 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 MEI1Q5TIA1 1274 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 TUBA3EQ6PEY2 450 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 CYHR1Q6ZMK1 362 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 GSTA5Q7RTV2 222 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 ANKRD37Q7Z713 158 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 ZNF295-AS1Q8N0V1 137 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 PRELID2Q8N945 189 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 MDS2Q8NDY4 140 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 OR51Q1Q8NH59 317 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 NPAS2Q99743 824 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 MACROD1Q9BQ69 325 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 HES7Q9BYE0 225 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 INTS10Q9NVR2 710 aaKnown RBP22.25■■□□□ 1.15
CPSF1-202ENST00000527827 C19orf25Q9UFG5 118 aaPredicted RBP22.25■■□□□ 1.15
CPSF1-202ENST00000527827 TINAGQ9UJW2 476 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 GUCA1BQ9UMX6 200 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 ZNF835Q9Y2P0 537 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 AKAP9Q99996 3911 aa22.25■■□□□ 1.15
CPSF1-202ENST00000527827 CCDC168Q8NDH2 2452 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 GTF3C1Q12789 2109 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 GFYI3L273 518 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 AVILO75366 819 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 MPC1LP0DKB6 136 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 IMPA1P29218 277 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 ST13P50502 369 aaKnown RBP22.24■■□□□ 1.15
CPSF1-202ENST00000527827 CASP6P55212 293 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 PTK6Q13882 451 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 RPS6KA1Q15418 735 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 CDSNQ15517 529 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 TTLL9Q3SXZ7 439 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 THEMIS2Q5TEJ8 643 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 CRLF3Q8IUI8 442 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 ADAMTS18Q8TE60 1221 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 GPR137Q96N19 417 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 TSGA10Q9BZW7 698 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 TMEM184CQ9NVA4 438 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 HCN3Q9P1Z3 774 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 KLHL42Q9P2K6 505 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 VPS9D1Q9Y2B5 631 aa22.24■■□□□ 1.15
CPSF1-202ENST00000527827 KCNE1BA0A087WTH5 132 aa22.23■■□□□ 1.15
CPSF1-202ENST00000527827 TTI1O43156 1089 aa22.23■■□□□ 1.15
CPSF1-202ENST00000527827 MAN1A2O60476 641 aa22.23■■□□□ 1.15
CPSF1-202ENST00000527827 IL1RNP18510 177 aa22.23■■□□□ 1.15
CPSF1-202ENST00000527827 AGAP20933 346 aa22.23■■□□□ 1.15
CPSF1-202ENST00000527827 CD96P40200 585 aa22.23■■□□□ 1.15
CPSF1-202ENST00000527827 XCR1P46094 333 aa22.23■■□□□ 1.15
CPSF1-202ENST00000527827 TMEM214Q6NUQ4 689 aaKnown RBP22.23■■□□□ 1.15
CPSF1-202ENST00000527827 ZNF549Q6P9A3 640 aa22.23■■□□□ 1.15
CPSF1-202ENST00000527827 Q6ZPB1 254 aaPredicted RBP22.23■■□□□ 1.15
CPSF1-202ENST00000527827 THAP3Q8WTV1 239 aaPredicted RBP22.23■■□□□ 1.15
CPSF1-202ENST00000527827 SCMH1Q96GD3 660 aa22.23■■□□□ 1.15
CPSF1-202ENST00000527827 KCNK13Q9HB14 408 aa22.23■■□□□ 1.15
CPSF1-202ENST00000527827 ANKRD10Q9NXR5 420 aa22.23■■□□□ 1.15
CPSF1-202ENST00000527827 C19orf84I3L1E1 186 aa22.22■■□□□ 1.15
CPSF1-202ENST00000527827 SGK494L7N484 410 aa22.22■■□□□ 1.15
CPSF1-202ENST00000527827 ESRRAP11474 423 aaPredicted RBP22.22■■□□□ 1.15
CPSF1-202ENST00000527827 PAMP19021 973 aa22.22■■□□□ 1.15
CPSF1-202ENST00000527827 BCL6P41182 706 aa22.22■■□□□ 1.15
CPSF1-202ENST00000527827 TERF1P54274 439 aa22.22■■□□□ 1.15
CPSF1-202ENST00000527827 RPS15AP62244 130 aaKnown RBP22.22■■□□□ 1.15
CPSF1-202ENST00000527827 ZNF470Q6ECI4 717 aa22.22■■□□□ 1.15
CPSF1-202ENST00000527827 DENND6AQ8IWF6 608 aa22.22■■□□□ 1.15
CPSF1-202ENST00000527827 M1APQ8TC57 530 aa22.22■■□□□ 1.15
CPSF1-202ENST00000527827 MCOLN3Q8TDD5 553 aa22.22■■□□□ 1.15
CPSF1-202ENST00000527827 TM4SF19Q96DZ7 209 aa22.22■■□□□ 1.15
CPSF1-202ENST00000527827 TSPAN10Q9H1Z9 355 aaPredicted RBP22.22■■□□□ 1.15
CPSF1-202ENST00000527827 KLHL1Q9NR64 748 aa22.22■■□□□ 1.15
CPSF1-202ENST00000527827 FBXO6Q9NRD1 293 aaPredicted RBP22.22■■□□□ 1.15
CPSF1-202ENST00000527827 ZKSCAN5Q9Y2L8 839 aa22.22■■□□□ 1.15
CPSF1-202ENST00000527827 DHRS7Q9Y394 339 aa22.22■■□□□ 1.15
CPSF1-202ENST00000527827 HIVEP1P15822 2718 aa22.22■■□□□ 1.15
CPSF1-202ENST00000527827 ASPDHA6ND91 283 aa22.21■■□□□ 1.15
CPSF1-202ENST00000527827 FAM227AF5H4B4 570 aa22.21■■□□□ 1.15
CPSF1-202ENST00000527827 ZBTB14O43829 449 aa22.21■■□□□ 1.15
CPSF1-202ENST00000527827 KIF5CO60282 957 aa22.21■■□□□ 1.15
CPSF1-202ENST00000527827 ENO3P13929 434 aaPredicted RBP22.21■■□□□ 1.15
CPSF1-202ENST00000527827 HRH2P25021 359 aa22.21■■□□□ 1.15
CPSF1-202ENST00000527827 AGTR2P50052 363 aa22.21■■□□□ 1.15
CPSF1-202ENST00000527827 RIPPLY3P57055 190 aa22.21■■□□□ 1.15
CPSF1-202ENST00000527827 CSNK1G2P78368 415 aa22.21■■□□□ 1.15
CPSF1-202ENST00000527827 CTBP1Q13363 440 aa22.21■■□□□ 1.15
CPSF1-202ENST00000527827 OR1C1Q15619 314 aa22.21■■□□□ 1.15
CPSF1-202ENST00000527827 EXT1Q16394 746 aa22.21■■□□□ 1.15
CPSF1-202ENST00000527827 MEP1AQ16819 746 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms