RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 STX16O14662 325 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 CEACAM4O75871 244 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 IPO13O94829 963 aaKnown RBP20.12■□□□□ 0.81
PKP3-205ENST00000527442 CLDN1O95832 211 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 HIST1H2AGP0C0S8 130 aaPredicted RBP20.12■□□□□ 0.81
PKP3-205ENST00000527442 HIST1H2ADP20671 130 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 ALDH3A1P30838 453 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 DCTP40126 519 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 ALDH18A1P54886 795 aaKnown RBP20.12■□□□□ 0.81
PKP3-205ENST00000527442 ACY1Q03154 408 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 C10orf107Q8IVU9 208 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 TCAIMQ8N3R3 496 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 PRR7Q8TB68 274 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 ADAMTS17Q8TE56 1095 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 UBTD2Q8WUN7 234 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 MR1Q95460 341 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 HIST1H2AHQ96KK5 128 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 HIST1H2AJQ99878 128 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 H2AFJQ9BTM1 129 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 MECRQ9BV79 373 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 UTP6Q9NYH9 597 aaKnown RBP20.12■□□□□ 0.81
PKP3-205ENST00000527442 CD274Q9NZQ7 290 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 ZNF451Q9Y4E5 1061 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 ABCA12Q86UK0 2595 aa20.12■□□□□ 0.81
PKP3-205ENST00000527442 CPNE3O75131 537 aaKnown RBP20.11■□□□□ 0.81
PKP3-205ENST00000527442 S100BP04271 92 aaPredicted RBP20.11■□□□□ 0.81
PKP3-205ENST00000527442 ANXA5P08758 320 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 GFAPP14136 432 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 NDUFS1P28331 727 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 MDH1P40925 334 aaKnown RBP20.11■□□□□ 0.81
PKP3-205ENST00000527442 DNAJB13P59910 316 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 ASPHQ12797 758 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 SETDB1Q15047 1291 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 LIPMQ5VYY2 423 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 SLC6A19Q695T7 634 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 DUS1LQ6P1R4 473 aaKnown RBP20.11■□□□□ 0.81
PKP3-205ENST00000527442 PTGR2Q8N8N7 351 aaPredicted RBP20.11■□□□□ 0.81
PKP3-205ENST00000527442 OR5AR1Q8NGP9 310 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 RAB3IL1Q8TBN0 382 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 DYDC1Q8WWB3 177 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 RAD51AP1Q96B01 352 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 RHBDF1Q96CC6 855 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 TCTN2Q96GX1 697 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 CCDC138Q96M89 665 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 PAIP2Q9BPZ3 127 aaKnown RBP20.11■□□□□ 0.81
PKP3-205ENST00000527442 NUDT9Q9BW91 350 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 C1QTNF3Q9BXJ4 246 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 SLC29A3Q9BZD2 475 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 IMP3Q9NV31 184 aaKnown RBP20.11■□□□□ 0.81
PKP3-205ENST00000527442 ARL15Q9NXU5 204 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 MAP10Q9P2G4 905 aa20.11■□□□□ 0.81
PKP3-205ENST00000527442 CFAP20Q9Y6A4 193 aaKnown RBP20.11■□□□□ 0.81
PKP3-205ENST00000527442 DPM1O60762 260 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 TRIM13O60858 407 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 SCRG1O75711 98 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 HNMTP50135 292 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 GRB7Q14451 532 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 GPR19Q15760 415 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 PDK4Q16654 411 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 CCSMST1Q4G0I0 132 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 FAM69BQ5VUD6 431 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 SULT1C3Q6IMI6 304 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 TTC23LQ6PF05 361 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 ZNF517Q6ZMY9 492 aaPredicted RBP20.1■□□□□ 0.81
PKP3-205ENST00000527442 BPHLQ86WA6 291 aaPredicted RBP20.1■□□□□ 0.81
PKP3-205ENST00000527442 KMT5CQ86Y97 462 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 NUDCD3Q8IVD9 361 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 TRIM42Q8IWZ5 723 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 SLC38A9Q8NBW4 561 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 FDCSPQ8NFU4 85 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 OR9A1PQ8NGU1 263 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 OR6Y1Q8NGX8 325 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 CKAP2Q8WWK9 683 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 SREK1Q8WXA9 508 aaKnown RBP20.1■□□□□ 0.81
PKP3-205ENST00000527442 FBXL8Q96CD0 374 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 L3HYPDHQ96EM0 354 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 EGFL8Q99944 293 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 CHST8Q9H2A9 424 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 CCDC134Q9H6E4 229 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 SLAMF7Q9NQ25 335 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 SPATA7Q9P0W8 599 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 POLG2Q9UHN1 485 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 ERRFI1Q9UJM3 462 aaPredicted RBP20.1■□□□□ 0.81
PKP3-205ENST00000527442 PTBP2Q9UKA9 531 aaKnown RBP20.1■□□□□ 0.81
PKP3-205ENST00000527442 PCDHGB7Q9Y5F8 929 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 ANKRD12Q6UB98 2062 aa20.1■□□□□ 0.81
PKP3-205ENST00000527442 TLCD2A6NGC4 264 aa20.09■□□□□ 0.81
PKP3-205ENST00000527442 NCF1BA6NI72 391 aaPredicted RBP20.09■□□□□ 0.81
PKP3-205ENST00000527442 NCF1CA8MVU1 366 aaPredicted RBP20.09■□□□□ 0.81
PKP3-205ENST00000527442 POLR3GO15318 223 aaPredicted RBP20.09■□□□□ 0.81
PKP3-205ENST00000527442 H2AFYO75367 372 aaKnown RBP20.09■□□□□ 0.81
PKP3-205ENST00000527442 GUCA1CO95843 209 aa20.09■□□□□ 0.81
PKP3-205ENST00000527442 LDLRP01130 860 aa20.09■□□□□ 0.81
PKP3-205ENST00000527442 ERGP11308 486 aa20.09■□□□□ 0.81
PKP3-205ENST00000527442 NCF1P14598 390 aaPredicted RBP20.09■□□□□ 0.81
PKP3-205ENST00000527442 ARL4DP49703 201 aa20.09■□□□□ 0.81
PKP3-205ENST00000527442 GUCY1A3Q02108 690 aa20.09■□□□□ 0.81
PKP3-205ENST00000527442 PFKFB4Q16877 469 aa20.09■□□□□ 0.81
PKP3-205ENST00000527442 LCN10Q6JVE6 187 aa20.09■□□□□ 0.81
PKP3-205ENST00000527442 METTL2BQ6P1Q9 378 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms