RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 SLC35A2P78381 396 aa19.67■□□□□ 0.74
SMIM3-201ENST00000526627 GAB1Q13480 694 aa19.67■□□□□ 0.74
SMIM3-201ENST00000526627 PDE12Q6L8Q7 609 aaKnown RBP19.67■□□□□ 0.74
SMIM3-201ENST00000526627 CAMKMTQ7Z624 323 aa19.67■□□□□ 0.74
SMIM3-201ENST00000526627 OR7G3Q8NG95 312 aa19.67■□□□□ 0.74
SMIM3-201ENST00000526627 ATL1Q8WXF7 558 aa19.67■□□□□ 0.74
SMIM3-201ENST00000526627 C7orf34Q96L11 122 aa19.67■□□□□ 0.74
SMIM3-201ENST00000526627 SAMD11Q96NU1 681 aa19.67■□□□□ 0.74
SMIM3-201ENST00000526627 BTNL2Q9UIR0 455 aa19.67■□□□□ 0.74
SMIM3-201ENST00000526627 EXO1Q9UQ84 846 aaKnown RBP19.67■□□□□ 0.74
SMIM3-201ENST00000526627 SAMHD1Q9Y3Z3 626 aaKnown RBP19.67■□□□□ 0.74
SMIM3-201ENST00000526627 PCDHGA10Q9Y5H3 936 aa19.67■□□□□ 0.74
SMIM3-201ENST00000526627 PTPRSQ13332 1948 aa19.66■□□□□ 0.74
SMIM3-201ENST00000526627 IDSP22304 550 aa19.66■□□□□ 0.74
SMIM3-201ENST00000526627 ITGA1P56199 1179 aa19.66■□□□□ 0.74
SMIM3-201ENST00000526627 IL1RL1Q01638 556 aa19.66■□□□□ 0.74
SMIM3-201ENST00000526627 HKDC1Q2TB90 917 aa19.66■□□□□ 0.74
SMIM3-201ENST00000526627 SYTL3Q4VX76 610 aa19.66■□□□□ 0.74
SMIM3-201ENST00000526627 GALNT18Q6P9A2 607 aa19.66■□□□□ 0.74
SMIM3-201ENST00000526627 DPPA4Q7L190 304 aa19.66■□□□□ 0.74
SMIM3-201ENST00000526627 CCDC71Q8IV32 467 aaPredicted RBP19.66■□□□□ 0.74
SMIM3-201ENST00000526627 HUS1BQ8NHY5 278 aa19.66■□□□□ 0.74
SMIM3-201ENST00000526627 GIPC3Q8TF64 312 aa19.66■□□□□ 0.74
SMIM3-201ENST00000526627 GLYATL1Q969I3 302 aa19.66■□□□□ 0.74
SMIM3-201ENST00000526627 TMEM159Q96B96 161 aa19.66■□□□□ 0.74
SMIM3-201ENST00000526627 VPS35Q96QK1 796 aa19.66■□□□□ 0.74
SMIM3-201ENST00000526627 FZD4Q9ULV1 537 aa19.66■□□□□ 0.74
SMIM3-201ENST00000526627 PRRC2BQ5JSZ5 2229 aaKnown RBP19.66■□□□□ 0.74
SMIM3-201ENST00000526627 J3QRK9 145 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 ADH1AP07327 375 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 CSF2RAP15509 400 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 PDHA2P29803 388 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 ARHGDIAP52565 204 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 KCNJ10P78508 379 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 E2F2Q14209 437 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 ACOX1Q15067 660 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 POM121L1PQ3SYA9 428 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 CPTPQ5TA50 214 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 FAHD1Q6P587 224 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 HORMAD1Q86X24 394 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 TTC29Q8NA56 475 aaPredicted RBP19.65■□□□□ 0.74
SMIM3-201ENST00000526627 ZFP90Q8TF47 636 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 COQ8BQ96D53 544 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 RHNO1Q9BSD3 238 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 TDP1Q9NUW8 608 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 TBCCD1Q9NVR7 557 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 GULP1Q9UBP9 304 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 QSOX1O00391 747 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 MAN1A2O60476 641 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 GCM2O75603 506 aaPredicted RBP19.65■□□□□ 0.74
SMIM3-201ENST00000526627 MYO1DO94832 1006 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 FKBP9O95302 570 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 CATP04040 527 aaKnown RBP19.65■□□□□ 0.74
SMIM3-201ENST00000526627 ANXA4P09525 319 aaPredicted RBP19.65■□□□□ 0.74
SMIM3-201ENST00000526627 MAP2K4P45985 399 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 MASP1P48740 699 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 EPHA5P54756 1037 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 CXCR4P61073 352 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 ZNF284Q2VY69 593 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 ZNF658BQ4V348 819 aaPredicted RBP19.65■□□□□ 0.74
SMIM3-201ENST00000526627 LDLRAP1Q5SW96 308 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 ABHD11Q8NFV4 315 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 STARD8Q92502 1023 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 CCM2Q9BSQ5 444 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 GMPPBQ9Y5P6 360 aa19.65■□□□□ 0.74
SMIM3-201ENST00000526627 ATG13O75143 517 aa19.64■□□□□ 0.74
SMIM3-201ENST00000526627 SYN1P17600 705 aa19.64■□□□□ 0.74
SMIM3-201ENST00000526627 POLR2EP19388 210 aaKnown RBP19.64■□□□□ 0.74
SMIM3-201ENST00000526627 ASMTP46597 345 aa19.64■□□□□ 0.74
SMIM3-201ENST00000526627 TMEM115Q12893 351 aaPredicted RBP19.64■□□□□ 0.74
SMIM3-201ENST00000526627 NPTX1Q15818 432 aa19.64■□□□□ 0.74
SMIM3-201ENST00000526627 SLCO4C1Q6ZQN7 724 aa19.64■□□□□ 0.74
SMIM3-201ENST00000526627 TSEN54Q7Z6J9 526 aaKnown RBP19.64■□□□□ 0.74
SMIM3-201ENST00000526627 TRUB1Q8WWH5 349 aaKnown RBP19.64■□□□□ 0.74
SMIM3-201ENST00000526627 MAL2Q969L2 176 aa19.64■□□□□ 0.74
SMIM3-201ENST00000526627 THUMPD1Q9NXG2 353 aaKnown RBP19.64■□□□□ 0.74
SMIM3-201ENST00000526627 VPS4AQ9UN37 437 aa19.64■□□□□ 0.74
SMIM3-201ENST00000526627 HCFC2Q9Y5Z7 792 aa19.64■□□□□ 0.74
SMIM3-201ENST00000526627 DGKBQ9Y6T7 804 aa19.64■□□□□ 0.74
SMIM3-201ENST00000526627 DPM1O60762 260 aa19.64■□□□□ 0.73
SMIM3-201ENST00000526627 RFPL2O75678 378 aa19.64■□□□□ 0.73
SMIM3-201ENST00000526627 MAD2L1BPQ15013 274 aaPredicted RBP19.64■□□□□ 0.73
SMIM3-201ENST00000526627 RGNQ15493 299 aa19.64■□□□□ 0.73
SMIM3-201ENST00000526627 ZNF77Q15935 545 aa19.64■□□□□ 0.73
SMIM3-201ENST00000526627 SMN1Q16637 294 aaKnown RBP19.64■□□□□ 0.73
SMIM3-201ENST00000526627 ZNF385BQ569K4 471 aa19.64■□□□□ 0.73
SMIM3-201ENST00000526627 ZNF805Q5CZA5 627 aa19.64■□□□□ 0.73
SMIM3-201ENST00000526627 C1orf53Q5VUE5 145 aa19.64■□□□□ 0.73
SMIM3-201ENST00000526627 LIPIQ6XZB0 460 aa19.64■□□□□ 0.73
SMIM3-201ENST00000526627 NPAS3Q8IXF0 933 aa19.64■□□□□ 0.73
SMIM3-201ENST00000526627 KLHL23Q8NBE8 558 aa19.64■□□□□ 0.73
SMIM3-201ENST00000526627 NEIL2Q969S2 332 aa19.64■□□□□ 0.73
SMIM3-201ENST00000526627 SPATA9Q9BWV2 254 aa19.64■□□□□ 0.73
SMIM3-201ENST00000526627 GPBP1L1Q9HC44 474 aaPredicted RBP19.64■□□□□ 0.73
SMIM3-201ENST00000526627 RAD18Q9NS91 495 aa19.64■□□□□ 0.73
SMIM3-201ENST00000526627 IL36AQ9UHA7 158 aa19.64■□□□□ 0.73
SMIM3-201ENST00000526627 TDRKHQ9Y2W6 561 aaKnown RBP19.64■□□□□ 0.73
SMIM3-201ENST00000526627 GABARAPO95166 117 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 MMP12P39900 470 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 RPS13P62277 151 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms