RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ARF5P84085 180 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 DR1Q01658 176 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 KDSRQ06136 332 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 RAD51Q06609 339 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 C2orf54Q08AI8 447 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 SLC10A7Q0GE19 358 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 SF3A3Q12874 501 aaKnown RBP eCLIP4.42□□□□□ -1.7
USP48-211ENST00000526044 LAMB3Q13751 1172 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 DHX34Q14147 1143 aaKnown RBP4.42□□□□□ -1.7
USP48-211ENST00000526044 PRPSAP1Q14558 356 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 PPP1R7Q15435 360 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 OASLQ15646 514 aaKnown RBP4.42□□□□□ -1.7
USP48-211ENST00000526044 DLG2Q15700 870 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 MLF2Q15773 248 aaPredicted RBP4.42□□□□□ -1.7
USP48-211ENST00000526044 PARP6Q2NL67 630 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 BTBD16Q32M84 506 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 FUT11Q495W5 492 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 FBXO43Q4G163 708 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 ANKRD20A2Q5SQ80 823 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 ANKRD20A1Q5TYW2 823 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 ANKRD20A3Q5VUR7 823 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 TMEM215Q68D42 235 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 TBC1D3GQ6DHY5 549 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 TBC1D3CQ6IPX1 549 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 TTC27Q6P3X3 843 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 ZNF474Q6S9Z5 364 aaPredicted RBP4.42□□□□□ -1.7
USP48-211ENST00000526044 LINGO4Q6UY18 593 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 C4orf22Q6V702 233 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 TPRG1Q6ZUI0 275 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 TBC1D3Q8IZP1 549 aaPredicted RBP4.42□□□□□ -1.7
USP48-211ENST00000526044 ZNF567Q8N184 647 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 RYBPQ8N488 228 aaPredicted RBP4.42□□□□□ -1.7
USP48-211ENST00000526044 MMGT1Q8N4V1 131 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 ALLCQ8N6M5 410 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 DCAF4L2Q8NA75 395 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 KDM1BQ8NB78 822 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 OR1N1Q8NGS0 311 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 CCDC110Q8TBZ0 833 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 WIPF2Q8TF74 440 aaPredicted RBP4.42□□□□□ -1.7
USP48-211ENST00000526044 HMGB4Q8WW32 186 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 ZFPM2Q8WW38 1151 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 IGFBPL1Q8WX77 278 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 SORCS1Q8WY21 1168 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 TRIM63Q969Q1 353 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 ISG20Q96AZ6 181 aaKnown RBP4.42□□□□□ -1.7
USP48-211ENST00000526044 RSRC1Q96IZ7 334 aaKnown RBP4.42□□□□□ -1.7
USP48-211ENST00000526044 AGAP3Q96P47 875 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 QKIQ96PU8 341 aaKnown RBP eCLIP4.42□□□□□ -1.73e-10■■□□□ 13.7
USP48-211ENST00000526044 PSKH2Q96QS6 385 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 KRT12Q99456 494 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 IL12RB2Q99665 862 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 LRRC1Q9BTT6 524 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 TRMOQ9BU70 441 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 MECRQ9BV79 373 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 CXorf56Q9H5V9 222 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 LMAN1LQ9HAT1 526 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 PDFQ9HBH1 243 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 MOV10Q9HCE1 1003 aaKnown RBP4.42□□□□□ -1.7
USP48-211ENST00000526044 NT5MQ9NPB1 228 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 RRAGDQ9NQL2 400 aaPredicted RBP4.42□□□□□ -1.7
USP48-211ENST00000526044 LIN7CQ9NUP9 197 aaKnown RBP4.42□□□□□ -1.7
USP48-211ENST00000526044 LRFN1Q9P244 771 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 KLHL8Q9P2G9 620 aaPredicted RBP4.42□□□□□ -1.7
USP48-211ENST00000526044 THAP10Q9P2Z0 257 aaPredicted RBP4.42□□□□□ -1.7
USP48-211ENST00000526044 AMACRQ9UHK6 382 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 MUTYHQ9UIF7 546 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 SLCO3A1Q9UIG8 710 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 NDRG2Q9UN36 371 aaKnown RBP4.42□□□□□ -1.7
USP48-211ENST00000526044 HS3ST2Q9Y278 367 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 TTLL3Q9Y4R7 772 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 KIAA1549LQ6ZVL6 1849 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 ATG2BQ96BY7 2078 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 ANKRD36A6QL64 1941 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 KANSL1LA0AUZ9 987 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 TARSL2A2RTX5 802 aaKnown RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 PABPN1LA6NDY0 278 aaKnown RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 WASH3PC4AMC7 463 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 RNF103O00237 685 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 TTI1O43156 1089 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 PRPF4O43172 522 aaKnown RBP eCLIP4.41□□□□□ -1.7
USP48-211ENST00000526044 PSMD3O43242 534 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 SMAD6O43541 496 aaKnown RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 SYNCRIPO60506 623 aaKnown RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 ATG13O75143 517 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 TMCC1O94876 653 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 POP4O95707 220 aaKnown RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 CD160O95971 181 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 ZSCAN5DPP0CG00 497 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 CHRNB1P11230 501 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 SRCP12931 536 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 ETS1P14921 441 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 PTPN3P26045 913 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 RPL22P35268 128 aaKnown RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 HSPA9P38646 679 aaKnown RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 CSNK1DP48730 415 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 LMAN1P49257 510 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 STK19P49842 368 aaPredicted RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 SERPINH1P50454 418 aaKnown RBP4.41□□□□□ -1.7
USP48-211ENST00000526044 TAS2R50P59544 299 aa4.41□□□□□ -1.7
USP48-211ENST00000526044 RHOAP61586 193 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms