RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 FERMT1Q9BQL6 677 aa3.68□□□□□ -1.82
CD44-215ENST00000525241 INPP5KQ9BT40 448 aa3.68□□□□□ -1.82
CD44-215ENST00000525241 CDK19Q9BWU1 502 aa3.68□□□□□ -1.82
CD44-215ENST00000525241 TRIM15Q9C019 465 aa3.68□□□□□ -1.82
CD44-215ENST00000525241 WWTR1Q9GZV5 400 aa3.68□□□□□ -1.82
CD44-215ENST00000525241 LMAN1LQ9HAT1 526 aa3.68□□□□□ -1.82
CD44-215ENST00000525241 TBC1D13Q9NVG8 400 aa3.68□□□□□ -1.82
CD44-215ENST00000525241 CSNK1G3Q9Y6M4 447 aa3.68□□□□□ -1.82
CD44-215ENST00000525241 C5orf52A6NGY3 159 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.67□□□□□ -1.82
CD44-215ENST00000525241 FCGR3BO75015 233 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 CEACAM4O75871 244 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 SORBS2O94875 1100 aaKnown RBP3.67□□□□□ -1.82
CD44-215ENST00000525241 ZFYP08048 801 aaPredicted RBP3.67□□□□□ -1.82
CD44-215ENST00000525241 SCG2P13521 617 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 LBPP18428 481 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 HOXC13P31276 330 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 TIA1P31483 386 aaKnown RBP eCLIP3.67□□□□□ -1.82
CD44-215ENST00000525241 HNF4AP41235 474 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 PRKCIP41743 596 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 TSFMP43897 325 aaKnown RBP3.67□□□□□ -1.82
CD44-215ENST00000525241 CAVIN1Q6NZI2 390 aaKnown RBP3.67□□□□□ -1.82
CD44-215ENST00000525241 TTC27Q6P3X3 843 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 NOTUMQ6P988 496 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 DCLRE1AQ6PJP8 1040 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 SPATA21Q7Z572 469 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 GLRX5Q86SX6 157 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 LRRTM1Q86UE6 522 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 METTL23Q86XA0 190 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 CCDC63Q8NA47 563 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 PRSS33Q8NF86 280 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 TAF15Q92804 592 aaKnown RBP eCLIP3.67□□□□□ -1.82
CD44-215ENST00000525241 RBM41Q96IZ5 413 aaKnown RBP3.67□□□□□ -1.82
CD44-215ENST00000525241 GBP5Q96PP8 586 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 INTS14Q96SY0 518 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 PKP2Q99959 881 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 VGLL1Q99990 258 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 CABLES2Q9BTV7 478 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 DNAI2Q9GZS0 605 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 HOXD1Q9GZZ0 328 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 MED20Q9H944 212 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 IL36AQ9UHA7 158 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 PILRBQ9UKJ0 227 aa3.67□□□□□ -1.82
CD44-215ENST00000525241 ARHGEF37A1IGU5 675 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 CYSRT1A8MQ03 144 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 KPNA7A9QM74 516 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 TMEM150CB9EJG8 249 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 PRSS46E5RG02 174 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 NPIPB9F8W1W9 429 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 FLRT2O43155 660 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 PPIP5K2O43314 1243 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 EIF5BO60841 1220 aaKnown RBP3.66□□□□□ -1.82
CD44-215ENST00000525241 PGLSO95336 258 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 TBX6O95947 436 aaPredicted RBP3.66□□□□□ -1.82
CD44-215ENST00000525241 UGT1A4P22310 534 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 IRX4P78413 519 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 CDO1Q16878 200 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 SPECC1Q5M775 1068 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 CES4AQ5XG92 561 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 ZNF772Q68DY9 489 aaPredicted RBP3.66□□□□□ -1.82
CD44-215ENST00000525241 TXNRD3NBQ6F5E7 133 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 FUT10Q6P4F1 479 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 KIF6Q6ZMV9 814 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 FRRS1Q6ZNA5 592 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 FAM47EQ6ZV65 393 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 PIGWQ7Z7B1 504 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 NUP37Q8NFH4 326 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 OR5T2Q8NGG2 359 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 OR4C15Q8NGM1 316 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 GTF3AQ92664 365 aaKnown RBP3.66□□□□□ -1.82
CD44-215ENST00000525241 AGAP3Q96P47 875 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 RBM4BQ9BQ04 359 aaKnown RBP3.66□□□□□ -1.82
CD44-215ENST00000525241 OVOL2Q9BRP0 275 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 TRIM51Q9BSJ1 452 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 UPF3AQ9H1J1 476 aaKnown RBP3.66□□□□□ -1.82
CD44-215ENST00000525241 RNF121Q9H920 327 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 HACD3Q9P035 362 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 THEGQ9P2T0 379 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 FBXL4Q9UKA2 621 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 KLK4Q9Y5K2 254 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 SELENOKQ9Y6D0 94 aa3.66□□□□□ -1.82
CD44-215ENST00000525241 TRAV34A0A0B4J273 112 aa3.65□□□□□ -1.83
CD44-215ENST00000525241 SOCS3O14543 225 aa3.65□□□□□ -1.83
CD44-215ENST00000525241 CYTIPO60759 359 aa3.65□□□□□ -1.83
CD44-215ENST00000525241 TBCAO75347 108 aaKnown RBP3.65□□□□□ -1.83
CD44-215ENST00000525241 YES1P07947 543 aa3.65□□□□□ -1.83
CD44-215ENST00000525241 VIMP08670 466 aaKnown RBP3.65□□□□□ -1.83
CD44-215ENST00000525241 AADACP22760 399 aa3.65□□□□□ -1.83
CD44-215ENST00000525241 RBMS1P29558 406 aaKnown RBP3.65□□□□□ -1.83
CD44-215ENST00000525241 IL10RBQ08334 325 aa3.65□□□□□ -1.83
CD44-215ENST00000525241 CALCOCO2Q13137 446 aa3.65□□□□□ -1.83
CD44-215ENST00000525241 NFATC2Q13469 925 aa3.65□□□□□ -1.83
CD44-215ENST00000525241 FAM133BQ5BKY9 247 aaKnown RBP3.65□□□□□ -1.83
CD44-215ENST00000525241 PRSS55Q6UWB4 352 aaPredicted RBP3.65□□□□□ -1.83
CD44-215ENST00000525241 GPR141Q7Z602 305 aa3.65□□□□□ -1.83
CD44-215ENST00000525241 PRUNE1Q86TP1 453 aa3.65□□□□□ -1.83
CD44-215ENST00000525241 MYPOPQ86VE0 399 aaPredicted RBP3.65□□□□□ -1.83
CD44-215ENST00000525241 TCEANCQ8N8B7 351 aa3.65□□□□□ -1.83
CD44-215ENST00000525241 NCOA7Q8NI08 942 aa3.65□□□□□ -1.83
CD44-215ENST00000525241 C11orf45Q8TAV5 145 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms