RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 NXT1Q9UKK6 140 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 HS3ST3B1Q9Y662 390 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 TLN1Q9Y490 2541 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 KCNE1BA0A087WTH5 132 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 OR1F1O43749 312 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 WISP1O95388 367 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 WISP3O95389 354 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 SERPIND1P05546 499 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 ANXA5P08758 320 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 CCDC166P0CW27 439 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 IL1RNP18510 177 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 GRK3P35626 688 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 SLC26A3P40879 764 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 GDF5P43026 501 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 CCR8P51685 355 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 MLLT10P55197 1068 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 DSG2Q14126 1118 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 CSHL1Q14406 222 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 NDUFA9Q16795 377 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 UBAP2Q5T6F2 1119 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 GRTP1Q5TC63 336 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 FRA10AC1Q70Z53 315 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 ASPGQ86U10 573 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 PARP9Q8IXQ6 854 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 GALNT16Q8N428 558 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 MMGT1Q8N4V1 131 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 MFSD9Q8NBP5 474 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 SLC13A3Q8WWT9 602 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 ANKRD7Q92527 254 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 NEIL2Q969S2 332 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 C8orf44Q96CB5 159 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 TM4SF19Q96DZ7 209 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 THAP11Q96EK4 314 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 MOCOSQ96EN8 888 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 TSPAN17Q96FV3 270 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 GPR22Q99680 433 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 PHACTR1Q9C0D0 580 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 SPNS1Q9H2V7 528 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 POPDC3Q9HBV1 291 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 ATP13A2Q9NQ11 1180 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 SEMA3GQ9NS98 782 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 LUZP4Q9P127 313 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 DMGDHQ9UI17 866 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 C3orf18Q9UK00 162 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 G3BP2Q9UN86 482 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 SLC22A14Q9Y267 594 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 DYRK1BQ9Y463 629 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 ZNF451Q9Y4E5 1061 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 OARD1Q9Y530 152 aa12.2□□□□□ -0.46
TRAPPC4-205ENST00000525079 IGLV3-12A0A075B6K2 115 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 SGK494L7N484 410 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 PRPF4O43172 522 aaKnown RBP eCLIP12.19□□□□□ -0.468e-8■■■■□ 24.2
TRAPPC4-205ENST00000525079 JRKO75564 520 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 IGHEP01854 428 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 STMN1P16949 149 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 ITGA3P26006 1051 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 STX2P32856 288 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 SPRP35270 261 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 AVPR1BP47901 424 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 EMP2P54851 167 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 KCNC4Q03721 635 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 SLMAPQ14BN4 828 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 FBXO48Q5FWF7 155 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 CMC1Q7Z7K0 106 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 ADAMTSL2Q86TH1 951 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 CAMKVQ8NCB2 501 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 ABHD11Q8NFV4 315 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 OR11G2Q8NGC1 345 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 OR4K1Q8NGD4 311 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 SLC5A11Q8WWX8 675 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 IFT81Q8WYA0 676 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 MVB12AQ96EY5 273 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 DERL2Q9GZP9 239 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 HCN3Q9P1Z3 774 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 NUP210LQ5VU65 1888 aa12.19□□□□□ -0.46
TRAPPC4-205ENST00000525079 SCN3AQ9NY46 2000 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 TRBC2A0A5B9 178 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 CTAGE15A4D2H0 777 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 IDSB3KWA1 339 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 WDR47O94967 919 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 B3GALT4O96024 378 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 HEXBP07686 556 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 CTAGE8P0CG41 777 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 CD1DP15813 335 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 VARSP26640 1264 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 RAB10P61026 200 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 CDKL1Q00532 357 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 ILF2Q12905 390 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 AIMP2Q13155 320 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 FAM53BQ14153 422 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 MYBPC3Q14896 1274 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 TGFBIQ15582 683 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 OR4D1Q15615 310 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 TUBB8Q3ZCM7 444 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 TMEM214Q6NUQ4 689 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 NXPE4Q6UWF7 544 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 RAPH1Q70E73 1250 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 TMPRSS11BQ86T26 416 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 CTAGE6Q86UF2 777 aa12.18□□□□□ -0.46
TRAPPC4-205ENST00000525079 GPSM1Q86YR5 675 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms