RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 CES4AQ5XG92 561 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 GTF2H2CQ6P1K8 395 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 C6orf15Q6UXA7 325 aaPredicted RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 LRIG3Q6UXM1 1119 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 CEACAM20Q6UY09 585 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ZYG11AQ6WRX3 759 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ATG14Q6ZNE5 492 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 LRRC70Q7Z2Q7 622 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 VN1R5Q7Z5H4 357 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 SYVN1Q86TM6 617 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 SPACA3Q8IXA5 215 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 GPR135Q8IZ08 494 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 CACNA2D3Q8IZS8 1091 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 CACTIN-AS1Q8N1I8 211 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 IL22RA1Q8N6P7 574 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ABHD11Q8NFV4 315 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 OR4F6Q8NGB9 312 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 OR5T3Q8NGG3 340 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 OR9A4Q8NGU2 314 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 RHEBL1Q8TAI7 183 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 AGR3Q8TD06 166 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ACMSDQ8TDX5 336 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 PPP4R1Q8TF05 950 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 CT55Q8WUE5 264 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 KCNE4Q8WWG9 221 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 SLC13A3Q8WWT9 602 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 FGF11Q92914 225 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 NKD1Q969G9 470 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ATP6V1E2Q96A05 226 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 RERGQ96A58 199 aaPredicted RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ZUFSPQ96AP4 578 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 CABS1Q96KC9 395 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 C10orf90Q96M02 699 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF578Q96N58 590 aaPredicted RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 F2RL3Q96RI0 385 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 KCNA7Q96RP8 456 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 SMC6Q96SB8 1091 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 MTERF1Q99551 399 aaKnown RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 HAUS8Q9BT25 410 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 NDC1Q9BTX1 674 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 TMEM109Q9BVC6 243 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 DDA1Q9BW61 102 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 SORBS1Q9BX66 1292 aaKnown RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 SPRY4Q9C004 299 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 AICDAQ9GZX7 198 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 IQCGQ9H095 443 aaKnown RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 CHST8Q9H2A9 424 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 RHBGQ9H310 441 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 OR51B5Q9H339 312 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF395Q9H8N7 513 aaPredicted RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ACTR8Q9H981 624 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 CNOT10Q9H9A5 744 aaKnown RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ACTR5Q9H9F9 607 aaPredicted RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 FANCEQ9HB96 536 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 TMBIM4Q9HC24 238 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 TNFRSF12AQ9NP84 129 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 FARSBQ9NSD9 589 aaKnown RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 CUTCQ9NTM9 273 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 TMEM184CQ9NVA4 438 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF446Q9NWS9 450 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 HCN3Q9P1Z3 774 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 DCDC2Q9UHG0 476 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 CROTQ9UKG9 612 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 PCTPQ9UKL6 214 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 GRID1Q9ULK0 1009 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF490Q9ULM2 529 aaPredicted RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 PLLPQ9Y342 182 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 FIS1Q9Y3D6 152 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 TMEM184BQ9Y519 407 aaPredicted RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 TIMM22Q9Y584 194 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 PCDHGA4Q9Y5G9 962 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 KCNE2Q9Y6J6 123 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ARID1BQ8NFD5 2236 aaPredicted RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 CEP250Q9BV73 2442 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 ARHGEF17Q96PE2 2063 aaPredicted RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 TRBC2A0A5B9 178 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 CCDC189A1A4V9 331 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 SRRM3A6NNA2 597 aaPredicted RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 TMEM233B4DJY2 109 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 FAM227AF5H4B4 570 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 STMND1H3BQB6 276 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 SGK494L7N484 410 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 MEN1O00255 615 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 NKX2-8O15522 239 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 FOXS1O43638 330 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 TYROBPO43914 113 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 CPNE3O75131 537 aaKnown RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 ALOX12BO75342 701 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 RDH16O75452 317 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 LYPLA1O75608 230 aaPredicted RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 CDC123O75794 336 aaPredicted RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 DXOO77932 396 aaKnown RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 IPO13O94829 963 aaKnown RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 ETHE1O95571 254 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 TBX6O95947 436 aaPredicted RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 GBAP04062 536 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 CHRNGP07510 517 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 GSTA1P08263 222 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 RPS17P08708 135 aaKnown RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 FURINP09958 794 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms