RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 TRIM31Q9BZY9 425 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 NACA2Q9H009 215 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 RETREG1Q9H6L5 497 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 ECT2Q9H8V3 914 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 ZWILCHQ9H900 591 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 KIF9Q9HAQ2 790 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 ZFP14Q9HCL3 533 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 MRPL47Q9HD33 250 aaKnown RBP2.94□□□□□ -1.94
CSDE1-208ENST00000524652 ZDHHC4Q9NPG8 344 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 SPHK2Q9NRA0 654 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 C2orf42Q9NWW7 574 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 DUS2Q9NX74 493 aaKnown RBP2.94□□□□□ -1.94
CSDE1-208ENST00000524652 RRN3Q9NYV6 651 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 EHD2Q9NZN4 543 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 MPP6Q9NZW5 540 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 CWC15Q9P013 229 aaKnown RBP2.94□□□□□ -1.94
CSDE1-208ENST00000524652 UVRAGQ9P2Y5 699 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 INTS6Q9UL03 887 aaKnown RBP2.94□□□□□ -1.94
CSDE1-208ENST00000524652 VANGL2Q9ULK5 521 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 STAP1Q9ULZ2 295 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 GUCA1BQ9UMX6 200 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 DUSP12Q9UNI6 340 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 OSGIN2Q9Y236 505 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 MTF2Q9Y483 593 aaPredicted RBP2.94□□□□□ -1.94
CSDE1-208ENST00000524652 ALG6Q9Y672 507 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 ZFP37Q9Y6Q3 630 aaPredicted RBP2.94□□□□□ -1.94
CSDE1-208ENST00000524652 PIKFYVEQ9Y2I7 2098 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 NAV3Q8IVL0 2385 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 hCG_1818297A0A087WSY0 165 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 A0A0D9SEW6 157 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 NEDD8-MDP1E9PL57 170 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 SPECC1L-ADORA2AF8WAN1 911 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 K7EQS6 105 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 HOXC11O43248 304 aaPredicted RBP2.93□□□□□ -1.94
CSDE1-208ENST00000524652 PI15O43692 258 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 CREB3O43889 395 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 CACNG3O60359 315 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 TBL1XO60907 577 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 HEXIM1O94992 359 aaKnown RBP2.93□□□□□ -1.94
CSDE1-208ENST00000524652 EGFP01133 1207 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 APOEP02649 317 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 ATP1A1P05023 1023 aaKnown RBP2.93□□□□□ -1.94
CSDE1-208ENST00000524652 PTMAP06454 111 aaKnown RBP2.93□□□□□ -1.94
CSDE1-208ENST00000524652 CCDC175P0C221 793 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 KRT10P13645 584 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 TNNT1P13805 278 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 GLULP15104 373 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 ERCC2P18074 760 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 KDELR1P24390 212 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 CTNNA2P26232 953 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 HLA-FP30511 346 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 CCR1P32246 355 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 CD70P32970 193 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 MAN1A1P33908 653 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 IFNAR2P48551 515 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 SNX16P57768 344 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 KRT83P78385 493 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 KDSRQ06136 332 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 CDK18Q07002 472 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 TDGQ13569 410 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 ALKBH1Q13686 389 aaKnown RBP2.93□□□□□ -1.94
CSDE1-208ENST00000524652 DPYSQ14117 519 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 DPYSL3Q14195 570 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 PIGHQ14442 188 aaPredicted RBP2.93□□□□□ -1.94
CSDE1-208ENST00000524652 PON2Q15165 354 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 SIX1Q15475 284 aaPredicted RBP2.93□□□□□ -1.94
CSDE1-208ENST00000524652 TAZQ16635 292 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 KRTAP24-1Q3LI83 254 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 FUT11Q495W5 492 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 SYTL3Q4VX76 610 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 PPP6R3Q5H9R7 873 aaPredicted RBP2.93□□□□□ -1.94
CSDE1-208ENST00000524652 BRMS1LQ5PSV4 323 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 ERMARDQ5T6L9 678 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 ATPAF1Q5TC12 328 aaPredicted RBP2.93□□□□□ -1.94
CSDE1-208ENST00000524652 NCBP2-AS2Q69YL0 99 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 C11orf63Q6NUN7 778 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 MTFR2Q6P444 385 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 MFSD7Q6UXD7 560 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 KIAA1324Q6UXG2 1013 aaKnown RBP2.93□□□□□ -1.94
CSDE1-208ENST00000524652 TADA2BQ86TJ2 420 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 SERPINA11Q86U17 422 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 ADIPOR2Q86V24 386 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 WDR5BQ86VZ2 330 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 ARHGAP12Q8IWW6 846 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 UNC45BQ8IWX7 931 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 SYTL1Q8IYJ3 562 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 APCDD1Q8J025 514 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 LGI2Q8N0V4 545 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 SLC35F6Q8N357 371 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 PQLC3Q8N755 202 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 PLD5Q8N7P1 536 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 ATP6V0D2Q8N8Y2 350 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 TEX45Q8NA69 505 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 TEKT4Q8WW24 435 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 SORCS1Q8WY21 1168 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 GOLGA1Q92805 767 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 AZIN2Q96A70 460 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 FAF2Q96CS3 445 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 BTN2A3PQ96KV6 586 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 SGCZQ96LD1 299 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms