RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 PKP4Q99569 1192 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 PRPF18Q99633 342 aaKnown RBP7.27□□□□□ -1.25
CTR9-202ENST00000524523 KXD1Q9BQD3 176 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 SLC17A9Q9BYT1 436 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 ACPTQ9BZG2 426 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 KLHL4Q9C0H6 718 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 KCNH6Q9H252 994 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 VCXQ9H320 206 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 ACTL8Q9H568 366 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 WDR26Q9H7D7 661 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 MVB12BQ9H7P6 319 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 WASH6PQ9NQA3 447 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 FBXL12Q9NXK8 326 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 MBD1Q9UIS9 605 aaPredicted RBP7.27□□□□□ -1.25
CTR9-202ENST00000524523 CD207Q9UJ71 328 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 ITM2BQ9Y287 266 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 SLC17A4Q9Y2C5 497 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 AP4S1Q9Y587 144 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 HEBP2Q9Y5Z4 205 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 MTCH2Q9Y6C9 303 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 AK5Q9Y6K8 562 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 MUC22E2RYF6 1773 aaPredicted RBP7.27□□□□□ -1.25
CTR9-202ENST00000524523 MYOFQ9NZM1 2061 aa7.27□□□□□ -1.25
CTR9-202ENST00000524523 MKI67P46013 3256 aaKnown RBP7.26□□□□□ -1.25
CTR9-202ENST00000524523 TRANK1O15050 2925 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 TMEM202A6NGA9 273 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 C10orf142B7Z368 130 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 H3BNX3 289 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 K7ESM1 405 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 RFXAPO00287 272 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 MAN2B1O00754 1011 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 INPP4BO15327 924 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 HNRNPRO43390 633 aaKnown RBP7.26□□□□□ -1.25
CTR9-202ENST00000524523 HYAL3O43820 417 aaPredicted RBP7.26□□□□□ -1.25
CTR9-202ENST00000524523 RNGTTO60942 597 aaKnown RBP7.26□□□□□ -1.25
CTR9-202ENST00000524523 PDE5AO76074 875 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 APBB3O95704 486 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 PGRP06401 933 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 XRCC1P18887 633 aaPredicted RBP7.26□□□□□ -1.25
CTR9-202ENST00000524523 IL10P22301 178 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 PPIBP23284 216 aaKnown RBP7.26□□□□□ -1.25
CTR9-202ENST00000524523 PTX3P26022 381 aaPredicted RBP7.26□□□□□ -1.25
CTR9-202ENST00000524523 NDUFS1P28331 727 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 PDHA2P29803 388 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 HTR6P50406 440 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 YPEL5P62699 121 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 TAP2Q03519 686 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 MTAPQ13126 283 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 DOC2AQ14183 400 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 INPP5AQ14642 412 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 MAPKAPK3Q16644 382 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 MUM1Q2TAK8 710 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 C2orf27AQ580R0 203 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 FBXO48Q5FWF7 155 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 XKR6Q5GH73 641 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 HABP4Q5JVS0 413 aaKnown RBP7.26□□□□□ -1.25
CTR9-202ENST00000524523 TCHHL1Q5QJ38 904 aaPredicted RBP7.26□□□□□ -1.25
CTR9-202ENST00000524523 OGFRL1Q5TC84 451 aaPredicted RBP7.26□□□□□ -1.25
CTR9-202ENST00000524523 NANOGP8Q6NSW7 305 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 TLDC1Q6P9B6 456 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 TRIM69Q86WT6 500 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 HEATR4Q86WZ0 1026 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 KRT78Q8N1N4 520 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 SLC44A3Q8N4M1 653 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 PACRGLQ8N7B6 248 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 TP53I13Q8NBR0 393 aaPredicted RBP7.26□□□□□ -1.25
CTR9-202ENST00000524523 VPS37AQ8NEZ2 397 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 ABHD11Q8NFV4 315 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 OR7G3Q8NG95 312 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 OR9I1Q8NGQ6 314 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 OR2T34Q8NGX1 318 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 CHTF18Q8WVB6 975 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 SLC13A3Q8WWT9 602 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 GTF2H4Q92759 462 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 TMEM125Q96AQ2 219 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 CCDC124Q96CT7 223 aaKnown RBP7.26□□□□□ -1.25
CTR9-202ENST00000524523 MTERF3Q96E29 417 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 WDR89Q96FK6 387 aaPredicted RBP7.26□□□□□ -1.25
CTR9-202ENST00000524523 ZNF764Q96H86 408 aaPredicted RBP7.26□□□□□ -1.25
CTR9-202ENST00000524523 ITCHQ96J02 903 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 CCDC115Q96NT0 180 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 CGREF1Q99674 301 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 SPATA9Q9BWV2 254 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 ZDHHC5Q9C0B5 715 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 RHBGQ9H310 441 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 PRO3102Q9H379 93 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 YY1AP1Q9H869 796 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 GORASP2Q9H8Y8 452 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 NANOGQ9H9S0 305 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 PELI2Q9HAT8 420 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 SGK2Q9HBY8 427 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 CCDC177Q9NQR7 707 aaPredicted RBP7.26□□□□□ -1.25
CTR9-202ENST00000524523 CCM2LQ9NUG4 571 aaPredicted RBP7.26□□□□□ -1.25
CTR9-202ENST00000524523 CLDND1Q9NY35 253 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 MAGEL2Q9UJ55 1249 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 PTGDR2Q9Y5Y4 395 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 HS3ST3A1Q9Y663 406 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 KIAA1549LQ6ZVL6 1849 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 DENND4AQ7Z401 1863 aa7.26□□□□□ -1.25
CTR9-202ENST00000524523 PDE4DIPQ5VU43 2346 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms