RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 TBC1D1Q86TI0 1168 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC9-215ENST00000524162 THOC6Q86W42 341 aaKnown RBP19.87■□□□□ 0.77
TRAPPC9-215ENST00000524162 GPSM1Q86YR5 675 aa19.87■□□□□ 0.77
TRAPPC9-215ENST00000524162 PDPRQ8NCN5 879 aa19.87■□□□□ 0.77
TRAPPC9-215ENST00000524162 STAG3L4Q8TBR4 150 aa19.87■□□□□ 0.77
TRAPPC9-215ENST00000524162 NEIL2Q969S2 332 aa19.87■□□□□ 0.77
TRAPPC9-215ENST00000524162 COL26A1Q96A83 441 aa19.87■□□□□ 0.77
TRAPPC9-215ENST00000524162 SEC16BQ96JE7 1060 aa19.87■□□□□ 0.77
TRAPPC9-215ENST00000524162 EGFL8Q99944 293 aa19.87■□□□□ 0.77
TRAPPC9-215ENST00000524162 PITHD1Q9GZP4 211 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC9-215ENST00000524162 ACSS2Q9NR19 701 aa19.87■□□□□ 0.77
TRAPPC9-215ENST00000524162 C14orf105Q9NVL8 296 aa19.87■□□□□ 0.77
TRAPPC9-215ENST00000524162 GPRC5BQ9NZH0 403 aa19.87■□□□□ 0.77
TRAPPC9-215ENST00000524162 COPG2Q9UBF2 871 aa19.87■□□□□ 0.77
TRAPPC9-215ENST00000524162 SLC22A14Q9Y267 594 aa19.87■□□□□ 0.77
TRAPPC9-215ENST00000524162 ACOT9Q9Y305 439 aa19.87■□□□□ 0.77
TRAPPC9-215ENST00000524162 DYRK1BQ9Y463 629 aa19.87■□□□□ 0.77
TRAPPC9-215ENST00000524162 SCN3AQ9NY46 2000 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 RP1L1Q8IWN7 2480 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 A0A087X1B8 175 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 PEX12O00623 359 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 P2RX6O15547 441 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 FOXS1O43638 330 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 FAM155BO75949 473 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 SLC35G6P0C7Q6 338 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 FBLP22087 321 aaKnown RBP19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 GSTM2P28161 218 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 LACTB2Q53H82 288 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 PPP1R32Q7Z5V6 425 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 ZNF605Q86T29 641 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 ASPGQ86U10 573 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 ISCA2Q86U28 154 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 PLD3Q8IV08 490 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 RHEBL1Q8TAI7 183 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 SLC44A1Q8WWI5 657 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 ISL2Q96A47 359 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 EHD1Q9H4M9 534 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 L2HGDHQ9H9P8 463 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 MKKSQ9NPJ1 570 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 CTSFQ9UBX1 484 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 NBASA2RRP1 2371 aa19.86■□□□□ 0.77
TRAPPC9-215ENST00000524162 A0A1W2PQ72 361 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 HMX2A2RU54 273 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 ARGFXA6NJG6 315 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 AGPSO00116 658 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 LCMT2O60294 686 aaKnown RBP19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 ABHD2P08910 425 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 LTA4HP09960 611 aaKnown RBP19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 ZGLP1P0C6A0 271 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 CXCR2P25025 360 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 CNTFP26441 200 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 BCL6P41182 706 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 SCTRP47872 440 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 AVPR1BP47901 424 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 SERPINB9P50453 376 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 NFATC3Q12968 1075 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 ATP1A4Q13733 1029 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 EFTUD2Q15029 972 aaKnown RBP eCLIP19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 FAM69BQ5VUD6 431 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 NXPE4Q6UWF7 544 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 RAPH1Q70E73 1250 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 AMER3Q8N944 861 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 STT3BQ8TCJ2 826 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 SLC13A3Q8WWT9 602 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 ALKBH8Q96BT7 664 aaKnown RBP19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 AIF1LQ9BQI0 150 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 TRIM55Q9BYV6 548 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 CLK4Q9HAZ1 481 aaKnown RBP19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 P4HTMQ9NXG6 502 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 ZFP69BQ9UJL9 534 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 ZNF180Q9UJW8 692 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 ANAPC2Q9UJX6 822 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 PTBP2Q9UKA9 531 aaKnown RBP19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 G3BP2Q9UN86 482 aaKnown RBP19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 PCSK5Q92824 1860 aa19.85■□□□□ 0.77
TRAPPC9-215ENST00000524162 OTX2P32243 289 aa19.84■□□□□ 0.77
TRAPPC9-215ENST00000524162 SKP1P63208 163 aa19.84■□□□□ 0.77
TRAPPC9-215ENST00000524162 REEP5Q00765 189 aa19.84■□□□□ 0.77
TRAPPC9-215ENST00000524162 OR4D1Q15615 310 aa19.84■□□□□ 0.77
TRAPPC9-215ENST00000524162 FAM83EQ2M2I3 478 aa19.84■□□□□ 0.77
TRAPPC9-215ENST00000524162 DCAF10Q5QP82 559 aa19.84■□□□□ 0.77
TRAPPC9-215ENST00000524162 TRMT10CQ7L0Y3 403 aaKnown RBP19.84■□□□□ 0.77
TRAPPC9-215ENST00000524162 CMC1Q7Z7K0 106 aa19.84■□□□□ 0.77
TRAPPC9-215ENST00000524162 TRPV3Q8NET8 790 aa19.84■□□□□ 0.77
TRAPPC9-215ENST00000524162 NT5CQ8TCD5 201 aa19.84■□□□□ 0.77
TRAPPC9-215ENST00000524162 MIEF2Q96C03 454 aa19.84■□□□□ 0.77
TRAPPC9-215ENST00000524162 NT5DC2Q9H857 520 aa19.84■□□□□ 0.77
TRAPPC9-215ENST00000524162 MAU2Q9Y6X3 613 aa19.84■□□□□ 0.77
TRAPPC9-215ENST00000524162 A0A087WUV0 522 aaPredicted RBP19.83■□□□□ 0.77
TRAPPC9-215ENST00000524162 FEZF1A0PJY2 475 aa19.83■□□□□ 0.77
TRAPPC9-215ENST00000524162 SUV39H1O43463 412 aa19.83■□□□□ 0.77
TRAPPC9-215ENST00000524162 KERAO60938 352 aa19.83■□□□□ 0.77
TRAPPC9-215ENST00000524162 ACSL3O95573 720 aa19.83■□□□□ 0.77
TRAPPC9-215ENST00000524162 C2P06681 752 aa19.83■□□□□ 0.77
TRAPPC9-215ENST00000524162 INHBAP08476 426 aa19.83■□□□□ 0.77
TRAPPC9-215ENST00000524162 IL10P22301 178 aa19.83■□□□□ 0.77
TRAPPC9-215ENST00000524162 SERPINB8P50452 374 aa19.83■□□□□ 0.77
TRAPPC9-215ENST00000524162 PCDH1Q08174 1060 aa19.83■□□□□ 0.77
TRAPPC9-215ENST00000524162 CDC16Q13042 620 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms