RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	ZGRF1	Q86YA3	2104 aa		11.74	□□□□□ -0.53
VEGFA-223	ENST00000523125	ICE1	Q9Y2F5	2266 aa		11.74	□□□□□ -0.53
VEGFA-223	ENST00000523125	LOC102723996	A0A087X1L8	192 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	IGHV1-45	A0A0A0MS14	117 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	FEZF1	A0PJY2	475 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	PRPF4	O43172	522 aa	Known RBP eCLIP	11.73	□□□□□ -0.53	5e-8	■■■□□ 16
VEGFA-223	ENST00000523125	KLHL18	O94889	574 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	BMP10	O95393	424 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	CDH1	P12830	882 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	CCND1	P24385	295 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	PAFAH1B1	P43034	410 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	AP1S2	P56377	157 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	MGAT5	Q09328	741 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	MRPL49	Q13405	166 aa	Known RBP	11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	PPP1R3A	Q16821	1122 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	DUPD1	Q68J44	220 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	FAAH2	Q6GMR7	532 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	TMEM214	Q6NUQ4	689 aa	Known RBP	11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	TMEM205	Q6UW68	189 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	NDUFAF7	Q7L592	441 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	ZC3HC1	Q86WB0	502 aa	Known RBP	11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	IQCK	Q8N0W5	287 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	CISD2	Q8N5K1	135 aa	Known RBP	11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	KCT2	Q8NC54	265 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	ABHD11	Q8NFV4	315 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	PSMF1	Q92530	271 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	TM9SF4	Q92544	642 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	ALKBH8	Q96BT7	664 aa	Known RBP	11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	PYCR2	Q96C36	320 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	FBXL8	Q96CD0	374 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	THAP11	Q96EK4	314 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	VPS50	Q96JG6	964 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	YIPF2	Q9BWQ6	316 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	C14orf105	Q9NVL8	296 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	ARL15	Q9NXU5	204 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	SNX24	Q9Y343	169 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	PCDHGA10	Q9Y5H3	936 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125	MAST4	O15021	2626 aa		11.73	□□□□□ -0.53
VEGFA-223	ENST00000523125		H0YIG0	161 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	MAP2K7	O14733	419 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	JRK	O75564	520 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	PIAS1	O75925	651 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	NSA2	O95478	260 aa	Known RBP	11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	ANXA5	P08758	320 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	PRR35	P0CG20	571 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	ZNF37A	P17032	561 aa	Predicted RBP	11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	HIST1H2AD	P20671	130 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	VARS	P26640	1264 aa	Known RBP	11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	TAS2R39	P59534	338 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	ZNF460	Q14592	562 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	NDUFA9	Q16795	377 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	CAPN13	Q6MZZ7	669 aa	Predicted RBP	11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	STRA8	Q7Z7C7	330 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	SLC26A11	Q86WA9	606 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	PDSS2	Q86YH6	399 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	PPP4R1	Q8TF05	950 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	ANP32B	Q92688	251 aa	Known RBP	11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	HIST1H2AH	Q96KK5	128 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	HIST1H2AJ	Q99878	128 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	WDR77	Q9BQA1	342 aa	Predicted RBP	11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	HAUS8	Q9BT25	410 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	H2AFJ	Q9BTM1	129 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	SARG	Q9BW04	601 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	ILKAP	Q9H0C8	392 aa	Predicted RBP	11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	ZNF700	Q9H0M5	742 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	SMYD2	Q9NRG4	433 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	ZFAT	Q9P243	1243 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	MKL2	Q9ULH7	1088 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	NOVA2	Q9UNW9	492 aa	Known RBP	11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	SPTAN1	Q13813	2472 aa	Known RBP	11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	CRYBG3	Q68DQ2	2970 aa		11.72	□□□□□ -0.53
VEGFA-223	ENST00000523125	SPTBN1	Q01082	2364 aa	Known RBP	11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	SVIL	O95425	2214 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	NSG1	A0A0A6YYJ2	146 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	FAM95C	A0A1B0GW59	222 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	SGK494	L7N484	410 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	CDC7	O00311	574 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	SEMA7A	O75326	666 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	CBX6	O95503	412 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	GUCA1C	O95843	209 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	HEXB	P07686	556 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	CELA2A	P08217	269 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	ENO2	P09104	434 aa	Predicted RBP	11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	IL1RN	P18510	177 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	AVPR1B	P47901	424 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	MEF2A	Q02078	507 aa	Predicted RBP	11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	EEF1A2	Q05639	463 aa	Known RBP	11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	MFAP5	Q13361	173 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	PCOLCE	Q15113	449 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	CATSPERE	Q5SY80	951 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	IRAK1BP1	Q5VVH5	260 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	ISLR2	Q6UXK2	745 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	ASPG	Q86U10	573 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	CEP97	Q8IW35	865 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	KBTBD2	Q8IY47	623 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	ZBED8	Q8IZ13	594 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	MFSD9	Q8NBP5	474 aa		11.71	□□□□□ -0.53
VEGFA-223	ENST00000523125	CAMKV	Q8NCB2	501 aa		11.71	□□□□□ -0.53

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