RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 SYT13Q7L8C5 426 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 SNX20Q7Z614 316 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 ADCK1Q86TW2 530 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 HORMAD1Q86X24 394 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 SFTPA1Q8IWL2 248 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 ZC3H7AQ8IWR0 971 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 PGBD3Q8N328 593 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 LIX1Q8N485 282 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 DEFB119Q8N690 84 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 HJURPQ8NCD3 748 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 DEFB124Q8NES8 71 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 MDGA1Q8NFP4 955 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 BPIFB6Q8NFQ5 453 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 OR52B6Q8NGF0 335 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 GTF2H4Q92759 462 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 PYURFQ96I23 114 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 ZC3H10Q96K80 434 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 ZNF583Q96ND8 569 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 OR52E6Q96RD3 313 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 CPPED1Q9BRF8 314 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 NTMT1Q9BV86 223 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 CD244Q9BZW8 370 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 CCDC90BQ9GZT6 254 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 LHPPQ9H008 270 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 PIF1Q9H611 641 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 PARVBQ9HBI1 364 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 TM9SF3Q9HD45 589 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 TMEM9BQ9NQ34 198 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 FSCN3Q9NQT6 498 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 DCAF13Q9NV06 445 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 KCTD5Q9NXV2 234 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 IKZF3Q9UKT9 509 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 THADAQ6YHU6 1953 aa8.37□□□□□ -1.07
CTNNA1-223ENST00000520520 ZNF106Q9H2Y7 1883 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 SAGE2PA6NJ88 616 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 H0Y626 953 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 M0QX08 132 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 CBX4O00257 560 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 MANBAO00462 879 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 MAGEB3O15480 346 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 DFNA5O60443 496 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 SOCS5O75159 536 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 ATP6V1G1O75348 118 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 SEC22BO75396 215 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 CREG1O75629 220 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 PRKD3O94806 890 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 TRIM16O95361 564 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 CLDN9O95484 217 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 PRAMEF1O95521 474 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 ANGPTL1O95841 491 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 ANXA5P08758 320 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 IL7RP16871 459 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 ZNF182P17025 639 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 MATN1P21941 496 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 PRPH2P23942 346 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 PTX3P26022 381 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 RPL10P27635 214 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 HMGCLP35914 325 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 DCTP40126 519 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 YAP1P46937 504 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 PPP3CCP48454 512 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 HSPA7P48741 367 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 BMXP51813 675 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 DGKQP52824 942 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 CLDN8P56748 225 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 SHC2P98077 582 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 CTBSQ01459 385 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 CD47Q08722 323 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 LRRC74AQ0VAA2 488 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 SP140Q13342 867 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 KRR1Q13601 381 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 COL9A2Q14055 689 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 SELPLGQ14242 412 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 ABRAXAS2Q15018 415 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 KIAA0040Q15053 153 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 FBXO43Q4G163 708 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 LRIF1Q5T3J3 769 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 RNF219Q5W0B1 726 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 ZDHHC20Q5W0Z9 365 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 EGFLAMQ63HQ2 1017 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 PMS2CLQ68D20 193 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 GTF2IRD2BQ6EKJ0 949 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 XKR5Q6UX68 686 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 MACC1Q6ZN28 852 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 PRSS48Q7RTY5 328 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 GTF2IRD2Q86UP8 949 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 P2RY8Q86VZ1 359 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 PIANPQ8IYJ0 282 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 TMEFF1Q8IYR6 380 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 SLC15A4Q8N697 577 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 FRMD1Q8N878 549 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 ABHD11Q8NFV4 315 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 OR10A6Q8NH74 314 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 PHF10Q8WUB8 498 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 HMGB4Q8WW32 186 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 TESCQ96BS2 214 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 VMP1Q96GC9 406 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 ZNF641Q96N77 438 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 FUNDC2Q9BWH2 189 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms