RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 MPHOSPH10O00566 681 aaKnown RBP3.2□□□□□ -1.9
VPS13B-207ENST00000518569 ZNF821O75541 412 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-207ENST00000518569 PGLSO95336 258 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 ATP1B1P05026 303 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 ZFYP08048 801 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-207ENST00000518569 TSPY3P0CV98 308 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 TSPY8P0CW00 308 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 PRKAR1AP10644 381 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 DESP17661 470 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 HLA-FP30511 346 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 VEGFCP49767 419 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 DNA2P51530 1060 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 RBP5P82980 135 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 TSPY1Q01534 308 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 GUCY2DQ02846 1103 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 HLA-BQ31612 363 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 TAF3Q5VWG9 929 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 FAAP20Q6NZ36 180 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 TRIM65Q6PJ69 517 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 BTN2A1Q7KYR7 527 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 CCDC60Q8IWA6 550 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-207ENST00000518569 ZNF614Q8N883 585 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 SLC37A3Q8NCC5 494 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 MAPK15Q8TD08 544 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 SYAP1Q96A49 352 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-207ENST00000518569 GDAP1L1Q96MZ0 367 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 SYT15Q9BQS2 421 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 SNX25Q9H3E2 840 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 SUDS3Q9H7L9 328 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-207ENST00000518569 PDRG1Q9NUG6 133 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 CHCHD3Q9NX63 227 aaKnown RBP3.2□□□□□ -1.9
VPS13B-207ENST00000518569 ERAP1Q9NZ08 941 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 RAI14Q9P0K7 980 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 IL36AQ9UHA7 158 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 ELF5Q9UKW6 265 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-207ENST00000518569 EXOGQ9Y2C4 368 aaKnown RBP3.2□□□□□ -1.9
VPS13B-207ENST00000518569 SMCHD1A6NHR9 2005 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 C17orf105B2RV13 164 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 F8VVB4 439 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 F8VWA3 439 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 FPGTO14772 594 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 IFIT3O14879 490 aaKnown RBP3.19□□□□□ -1.9
VPS13B-207ENST00000518569 HTATSF1O43719 755 aaKnown RBP3.19□□□□□ -1.9
VPS13B-207ENST00000518569 BAG3O95817 575 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 SERPING1P05155 500 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 VIMP08670 466 aaKnown RBP3.19□□□□□ -1.9
VPS13B-207ENST00000518569 CD59P13987 128 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 STMN1P16949 149 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 CASTP20810 708 aaKnown RBP3.19□□□□□ -1.9
VPS13B-207ENST00000518569 ELAVL4P26378 380 aaKnown RBP3.19□□□□□ -1.9
VPS13B-207ENST00000518569 TIA1P31483 386 aaKnown RBP eCLIP3.19□□□□□ -1.9
VPS13B-207ENST00000518569 SFTPDP35247 375 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 CRKLP46109 303 aaKnown RBP3.19□□□□□ -1.9
VPS13B-207ENST00000518569 LUMP51884 338 aaPredicted RBP3.19□□□□□ -1.9
VPS13B-207ENST00000518569 PAX9P55771 341 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 CSNK2BP67870 215 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 BFSP1Q12934 665 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 SRSF9Q13242 221 aaKnown RBP eCLIP3.19□□□□□ -1.9
VPS13B-207ENST00000518569 EFTUD2Q15029 972 aaKnown RBP eCLIP3.19□□□□□ -1.9
VPS13B-207ENST00000518569 FCN2Q15485 313 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 PARP10Q53GL7 1025 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 ODF2Q5BJF6 829 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 DNAJC21Q5F1R6 531 aaKnown RBP3.19□□□□□ -1.9
VPS13B-207ENST00000518569 WLSQ5T9L3 541 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 TXNRD3NBQ6F5E7 133 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 DCLRE1AQ6PJP8 1040 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 MSANTD1Q6ZTZ1 278 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 FCRLAQ7L513 359 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 GPR141Q7Z602 305 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 PTAR1Q7Z6K3 402 aaPredicted RBP3.19□□□□□ -1.9
VPS13B-207ENST00000518569 C4orf19Q8IY42 314 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 GPC2Q8N158 579 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 KLHDC1Q8N7A1 406 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 MNS1Q8NEH6 495 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 OR2T6Q8NHC8 308 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 SMAP2Q8WU79 429 aaPredicted RBP3.19□□□□□ -1.9
VPS13B-207ENST00000518569 HEXDCQ8WVB3 486 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 PYCR2Q96C36 320 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 POM121L2Q96KW2 1035 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 LINC00479Q96M42 142 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 KLHL5Q96PQ7 755 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 BTBD9Q96Q07 612 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 NDNQ99608 321 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 TDRD1Q9BXT4 1180 aaKnown RBP3.19□□□□□ -1.9
VPS13B-207ENST00000518569 ZWILCHQ9H900 591 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 LMAN1LQ9HAT1 526 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 RABL2BQ9UNT1 228 aa3.19□□□□□ -1.9
VPS13B-207ENST00000518569 TRAV34A0A0B4J273 112 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 SNURFLB1AK76 121 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 TMEM150CB9EJG8 249 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 FLRT2O43155 660 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 PRAF2O60831 178 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 FCGR3BO75015 233 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 NXPH2O95156 264 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 CGAP01215 116 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 IGHDP01880 384 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 YES1P07947 543 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 FAM58BPP0C7Q3 252 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 ATP6V1B1P15313 513 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 RPL35AP18077 110 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms