RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 PRMT9Q6P2P2 845 aa20.96■□□□□ 0.95
VEGFA-217ENST00000518538 SYVN1Q86TM6 617 aa20.96■□□□□ 0.95
VEGFA-217ENST00000518538 TDRPQ86YL5 185 aa20.96■□□□□ 0.95
VEGFA-217ENST00000518538 ARHGEF39Q8N4T4 335 aa20.96■□□□□ 0.95
VEGFA-217ENST00000518538 CAVIN3Q969G5 261 aa20.96■□□□□ 0.95
VEGFA-217ENST00000518538 TM4SF19Q96DZ7 209 aa20.96■□□□□ 0.95
VEGFA-217ENST00000518538 SPNS1Q9H2V7 528 aa20.96■□□□□ 0.95
VEGFA-217ENST00000518538 OR1F1O43749 312 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 KLK8O60259 260 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 CD63P08962 238 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 C1GALT1C1LP0DN25 315 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 PRKAR1AP10644 381 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 GFAPP14136 432 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 AGTR2P50052 363 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 ALDH18A1P54886 795 aaKnown RBP20.95■□□□□ 0.94
VEGFA-217ENST00000518538 RPS18P62269 152 aaKnown RBP20.95■□□□□ 0.94
VEGFA-217ENST00000518538 CYP4F2P78329 520 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 SETDB1Q15047 1291 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 RASA2Q15283 850 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 NDUFA9Q16795 377 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 ATG9BQ674R7 924 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 SLCO4C1Q6ZQN7 724 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 ASPGQ86U10 573 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 SNX31Q8N9S9 440 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 CAMKVQ8NCB2 501 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 ZNF740Q8NDX6 193 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 ACMSDQ8TDX5 336 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 MZB1Q8WU39 189 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 FKBP10Q96AY3 582 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 MVB12AQ96EY5 273 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 SLC22A11Q9NSA0 550 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 TBK1Q9UHD2 729 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 GPN3Q9UHW5 284 aaPredicted RBP20.95■□□□□ 0.94
VEGFA-217ENST00000518538 TCFL5Q9UL49 500 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 PADI2Q9Y2J8 665 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 ASB1Q9Y576 335 aa20.95■□□□□ 0.94
VEGFA-217ENST00000518538 DSPP15924 2871 aaKnown RBP20.95■□□□□ 0.94
VEGFA-217ENST00000518538 MDC1Q14676 2089 aaKnown RBP20.94■□□□□ 0.94
VEGFA-217ENST00000518538 CLGNO14967 610 aa20.94■□□□□ 0.94
VEGFA-217ENST00000518538 AHRP35869 848 aa20.94■□□□□ 0.94
VEGFA-217ENST00000518538 SCTRP47872 440 aa20.94■□□□□ 0.94
VEGFA-217ENST00000518538 NFKB2Q00653 900 aa20.94■□□□□ 0.94
VEGFA-217ENST00000518538 PFKFB4Q16877 469 aa20.94■□□□□ 0.94
VEGFA-217ENST00000518538 MLIPQ5VWP3 458 aa20.94■□□□□ 0.94
VEGFA-217ENST00000518538 MRPL14Q6P1L8 145 aaKnown RBP20.94■□□□□ 0.94
VEGFA-217ENST00000518538 C16orf46Q6P387 395 aa20.94■□□□□ 0.94
VEGFA-217ENST00000518538 LCA5Q86VQ0 697 aa20.94■□□□□ 0.94
VEGFA-217ENST00000518538 DTWD1Q8N5C7 304 aa20.94■□□□□ 0.94
VEGFA-217ENST00000518538 SLC13A3Q8WWT9 602 aa20.94■□□□□ 0.94
VEGFA-217ENST00000518538 SCYL1Q96KG9 808 aa20.94■□□□□ 0.94
VEGFA-217ENST00000518538 CATSPER2Q96P56 530 aa20.94■□□□□ 0.94
VEGFA-217ENST00000518538 EHD1Q9H4M9 534 aa20.94■□□□□ 0.94
VEGFA-217ENST00000518538 CPSF2Q9P2I0 782 aaKnown RBP20.94■□□□□ 0.94
VEGFA-217ENST00000518538 XPR1Q9UBH6 696 aa20.94■□□□□ 0.94
VEGFA-217ENST00000518538 OPTCQ9UBM4 332 aa20.94■□□□□ 0.94
VEGFA-217ENST00000518538 RAB21Q9UL25 225 aa20.94■□□□□ 0.94
VEGFA-217ENST00000518538 CDC14AQ9UNH5 594 aa20.94■□□□□ 0.94
VEGFA-217ENST00000518538 FER1L5A0AVI2 2057 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 K7EPI3 171 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 H2AFYO75367 372 aaKnown RBP20.93■□□□□ 0.94
VEGFA-217ENST00000518538 STATHP02808 62 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 ITGB2P05107 769 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 TUBBP07437 444 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 NUDT17P0C025 328 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 SLC35G6P0C7Q6 338 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 ATXN8OSP0DMR3 200 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 CXCR2P25025 360 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 VARSP26640 1264 aaKnown RBP20.93■□□□□ 0.94
VEGFA-217ENST00000518538 SLCO1A2P46721 670 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 OR1D4P47884 311 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 FAM53BQ14153 422 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 ERV3-1Q14264 604 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 SLC9A5Q14940 896 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 COX15Q7KZN9 410 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 OVCH1Q7RTY7 1134 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 METTL27Q8N6F8 245 aaPredicted RBP20.93■□□□□ 0.94
VEGFA-217ENST00000518538 EPS8L3Q8TE67 593 aaKnown RBP20.93■□□□□ 0.94
VEGFA-217ENST00000518538 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.93■□□□□ 0.94
VEGFA-217ENST00000518538 MRPL57Q9BQC6 102 aaKnown RBP20.93■□□□□ 0.94
VEGFA-217ENST00000518538 DRC3Q9H069 523 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 ZNF304Q9HCX3 659 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 ZFP69BQ9UJL9 534 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 TMCO1Q9UM00 188 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 MAU2Q9Y6X3 613 aa20.93■□□□□ 0.94
VEGFA-217ENST00000518538 SMIM23A6NLE4 172 aa20.92■□□□□ 0.94
VEGFA-217ENST00000518538 KLF7O75840 302 aaPredicted RBP20.92■□□□□ 0.94
VEGFA-217ENST00000518538 ALBP02768 609 aa20.92■□□□□ 0.94
VEGFA-217ENST00000518538 EPORP19235 508 aa20.92■□□□□ 0.94
VEGFA-217ENST00000518538 PWP1Q13610 501 aa20.92■□□□□ 0.94
VEGFA-217ENST00000518538 SLBPQ14493 270 aaKnown RBP eCLIP20.92■□□□□ 0.94
VEGFA-217ENST00000518538 NAA30Q147X3 362 aaPredicted RBP20.92■□□□□ 0.94
VEGFA-217ENST00000518538 UGT8Q16880 541 aa20.92■□□□□ 0.94
VEGFA-217ENST00000518538 TMEM214Q6NUQ4 689 aaKnown RBP20.92■□□□□ 0.94
VEGFA-217ENST00000518538 ANKRD53Q8N9V6 530 aa20.92■□□□□ 0.94
VEGFA-217ENST00000518538 TTC9Q92623 222 aa20.92■□□□□ 0.94
VEGFA-217ENST00000518538 WDR34Q96EX3 536 aa20.92■□□□□ 0.94
VEGFA-217ENST00000518538 MACROD1Q9BQ69 325 aa20.92■□□□□ 0.94
VEGFA-217ENST00000518538 PITHD1Q9GZP4 211 aaPredicted RBP20.92■□□□□ 0.94
VEGFA-217ENST00000518538 SLC26A1Q9H2B4 701 aa20.92■□□□□ 0.94
VEGFA-217ENST00000518538 MRPL46Q9H2W6 279 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms