RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 CDH13P55290 713 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 CARD18P57730 90 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 KCNK10P57789 538 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 GPX6P59796 221 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 BTG1P62324 171 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 BEX3Q00994 111 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 CSTF1Q05048 431 aaKnown RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC3A1Q07837 685 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 FOXO1Q12778 655 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 TUBB3Q13509 450 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 TFDP2Q14188 446 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ARHGAP19Q14CB8 494 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 SIX1Q15475 284 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 SMAD2Q15796 467 aaKnown RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 STXBP2Q15833 593 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 DPYSL2Q16555 572 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 LRRC26Q2I0M4 334 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 HKDC1Q2TB90 917 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 UAP1L1Q3KQV9 507 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZIK1Q3SY52 487 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 Q5BKY6 102 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 SULT6B1Q6IMI4 303 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 LIN54Q6MZP7 749 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 PAPD4Q6PIY7 484 aaKnown RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZC3H14Q6PJT7 736 aaKnown RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 SUSD1Q6UWL2 747 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 VITQ6UXI7 678 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 LRRC55Q6ZSA7 311 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 TMPRSS11FQ6ZWK6 438 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 USP53Q70EK8 1073 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 POLNQ7Z5Q5 900 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ANKRD46Q86W74 232 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 TMEM17Q86X19 198 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 DDIASQ8IXT1 998 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZC3H3Q8IXZ2 948 aaKnown RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF561Q8N587 486 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 TRAM1L1Q8N609 369 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZMIZ2Q8NF64 920 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 OR13C3Q8NGS6 347 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 OR6B3Q8NGW1 331 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 AKR7LQ8NHP1 331 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 SPATA22Q8NHS9 363 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 NANPQ8TBE9 248 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ASB15Q8WXK1 588 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 CPT1BQ92523 772 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 RIT1Q92963 219 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 CD101Q93033 1021 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC38A4Q969I6 547 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 RAB24Q969Q5 203 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ROPN1LQ96C74 230 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 BIRC7Q96CA5 298 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 REPS1Q96D71 796 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ELP4Q96EB1 424 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 YIPF6Q96EC8 236 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZC3HAV1LQ96H79 300 aaKnown RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 PRR11Q96HE9 360 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 NARS2Q96I59 477 aaKnown RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 MRGPRX3Q96LB0 322 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF300Q96RE9 604 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 CAMKK2Q96RR4 588 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 NEU1Q99519 415 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 HOPXQ9BPY8 73 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 C2orf88Q9BSF0 95 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 APOL6Q9BWW8 343 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 HDHD5Q9BXW7 423 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF700Q9H0M5 742 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 DCSTAMPQ9H295 470 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 C12orf65Q9H3J6 166 aaKnown RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 SPACA1Q9HBV2 294 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 PCDH9Q9HC56 1237 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 EMC7Q9NPA0 242 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 SPAG4Q9NPE6 437 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 PDLIM7Q9NR12 457 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 CTPS2Q9NRF8 586 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 SDHAF2Q9NX18 166 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 BTG4Q9NY30 223 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ADA2Q9NZK5 511 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 COL20A1Q9P218 1284 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 SPASTQ9UBP0 616 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 GULP1Q9UBP9 304 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 POLLQ9UGP5 575 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 SARDHQ9UL12 918 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 STAP1Q9ULZ2 295 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 MAGED2Q9UNF1 606 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 SSR3Q9UNL2 185 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ANKRD6Q9Y2G4 727 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 PLEKHA6Q9Y2H5 1048 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC6A5Q9Y345 797 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ORC6Q9Y5N6 252 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 FAM208AQ9UK61 1670 aaKnown RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 NAV1Q8NEY1 1877 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ADGRF5Q8IZF2 1346 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 NWD1Q149M9 1564 aa4.65□□□□□ -1.66
HMGB1P19-201ENST00000517578 ALKQ9UM73 1620 aa4.65□□□□□ -1.66
HMGB1P19-201ENST00000517578 DCCP43146 1447 aa4.65□□□□□ -1.66
HMGB1P19-201ENST00000517578 CCDC88AQ3V6T2 1871 aa4.65□□□□□ -1.66
HMGB1P19-201ENST00000517578 DHRS12A0PJE2 317 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 BCLAF3A2AJT9 711 aaKnown RBP4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 PI4KAP2A4QPH2 592 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms