RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 PRICKLE1Q96MT3 831 aaPredicted RBP2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 ZNF599Q96NL3 588 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 RPRD1AQ96P16 312 aaPredicted RBP2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 MCEEQ96PE7 176 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 OSBPL9Q96SU4 736 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 DPH2Q9BQC3 489 aaPredicted RBP2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 LRRC1Q9BTT6 524 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 NUP85Q9BW27 656 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 TLR10Q9BXR5 811 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 TXLNGYQ9BZA5 131 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 TSGA10Q9BZW7 698 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 CEP44Q9C0F1 390 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 MEGF9Q9H1U4 602 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 CATSPERBQ9H7T0 1116 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 ZWILCHQ9H900 591 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 ACTR5Q9H9F9 607 aaPredicted RBP2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 ZMAT3Q9HA38 289 aaKnown RBP2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 CARS2Q9HA77 564 aaKnown RBP2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 NTN4Q9HB63 628 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 TMBIM4Q9HC24 238 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 KLC4Q9NSK0 619 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 HAUS2Q9NVX0 235 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 TMEM248Q9NWD8 314 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 DDX56Q9NY93 547 aaKnown RBP2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 SELENONQ9NZV5 590 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 SEMA5BQ9P283 1151 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 CTTNBP2NLQ9P2B4 639 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 ZNF212Q9UDV6 495 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 IL36AQ9UHA7 158 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 AMACRQ9UHK6 382 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 GPN3Q9UHW5 284 aaPredicted RBP2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 FZD10Q9ULW2 581 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 GUCA1BQ9UMX6 200 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 MOKQ9UQ07 419 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 PCDHA13Q9Y5I0 950 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 OR51B4Q9Y5P0 310 aa2.95□□□□□ -1.94
SCARNA13-201ENST00000516672 LRP1BQ9NZR2 4599 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 IGHV5-51A0A0C4DH38 117 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 A0A0G2JLM5 398 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 MIF4GDA9UHW6 222 aaKnown RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 H3BRJ5 948 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 I6L893 689 aaPredicted RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 NDUFAB1O14561 156 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 TFECO14948 347 aaPredicted RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 AREL1O15033 823 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 PSTPIP1O43586 416 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 BUB1O43683 1085 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 KDELR3O43731 214 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 MGRN1O60291 552 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 BUB1BO60566 1050 aaPredicted RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 RAMP2O60895 175 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 ABCB7O75027 752 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 TJP3O95049 919 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 GAS8-AS1O95177 125 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 EML2O95834 649 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 FAM107AO95990 144 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 MOCS2O96007 188 aaPredicted RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 RNASE1P07998 156 aaKnown RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 HOXC4P09017 264 aaPredicted RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 TFE3P19532 575 aaPredicted RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 AGXTP21549 392 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 PCMT1P22061 227 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 KELP23276 732 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 MYF6P23409 242 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 OR1E1P30953 314 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 SERPINB6P35237 376 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 ARL4AP40617 200 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 ACTR1BP42025 376 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 SCTRP47872 440 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 CSNK1DP48730 415 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 NR2C2P49116 596 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 CARSP49589 748 aaKnown RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 CDKN1CP49918 316 aaPredicted RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 SUOXP51687 545 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 NR0B1P51843 470 aaKnown RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 CCNHP51946 323 aaPredicted RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 SEC24CP53992 1094 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 VSX2P58304 361 aaPredicted RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 ACTR1AP61163 376 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 MRPS25P82663 173 aaKnown RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 SLC7A5Q01650 507 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 OGDHQ02218 1023 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 SLC25A11Q02978 314 aaKnown RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 GNA12Q03113 381 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 ZNF844Q08AG5 666 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 FAPQ12884 760 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 ABRQ12979 859 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 MTM1Q13496 603 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 DPYSQ14117 519 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 RFTN1Q14699 578 aaPredicted RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 GRM3Q14832 879 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 CRYMQ14894 314 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 POLD3Q15054 466 aaPredicted RBP2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 PLCL1Q15111 1095 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 TRADDQ15628 312 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 GPR19Q15760 415 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 TAZQ16635 292 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 NRF1Q16656 503 aa2.94□□□□□ -1.94
SCARNA13-201ENST00000516672 C15orf59Q2T9L4 293 aaPredicted RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms