RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-223ENST00000514402 OTUB1Q96FW1 271 aaPredicted RBP3.34□□□□□ -1.87
MATR3-223ENST00000514402 BTBD9Q96Q07 612 aa3.34□□□□□ -1.87
MATR3-223ENST00000514402 SLC2A11Q9BYW1 496 aa3.34□□□□□ -1.87
MATR3-223ENST00000514402 PUS3Q9BZE2 481 aaKnown RBP3.34□□□□□ -1.87
MATR3-223ENST00000514402 TSPAN16Q9UKR8 245 aa3.34□□□□□ -1.87
MATR3-223ENST00000514402 ZNF510Q9Y2H8 683 aa3.34□□□□□ -1.87
MATR3-223ENST00000514402 ADAMTS9Q9P2N4 1935 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 A8MU10 97 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 NPIPB9F8W1W9 429 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 AP5Z1O43299 807 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 NXPH4O95158 308 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 HOXD4P09016 255 aaPredicted RBP3.33□□□□□ -1.88
MATR3-223ENST00000514402 IL11P20809 199 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 IL4RP24394 825 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 LIMK2P53671 638 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 CALD1Q05682 793 aaKnown RBP3.33□□□□□ -1.88
MATR3-223ENST00000514402 ACSM1Q08AH1 577 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 RASGEF1BQ0VAM2 473 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 TOMM20Q15388 145 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 C15orf32Q32M92 178 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 CCDC184Q52MB2 194 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 CST9LP1Q5W188 147 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 NAA16Q6N069 864 aaPredicted RBP3.33□□□□□ -1.88
MATR3-223ENST00000514402 TLK2Q86UE8 772 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 ATP8B4Q8TF62 1192 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 CHPT1Q8WUD6 406 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 SEPT1Q8WYJ6 367 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 PDLIM5Q96HC4 596 aaKnown RBP3.33□□□□□ -1.88
MATR3-223ENST00000514402 KLHL5Q96PQ7 755 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 EGLN3Q9H6Z9 239 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 HEXA-AS1Q9H8Q6 139 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 DNAJC4Q9NNZ3 241 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 TBC1D13Q9NVG8 400 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 GTSE1Q9NYZ3 720 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 CLIC5Q9NZA1 410 aa3.33□□□□□ -1.88
MATR3-223ENST00000514402 IGLV4-3A0A075B6K6 122 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 RNF103O00237 685 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 SNAP91O60641 907 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 CELF2O95319 508 aaKnown RBP3.32□□□□□ -1.88
MATR3-223ENST00000514402 POP4O95707 220 aaKnown RBP3.32□□□□□ -1.88
MATR3-223ENST00000514402 BAG3O95817 575 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 GSRP00390 522 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 MYBL1P10243 752 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 CYP11B2P19099 503 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 ACHEP22303 614 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 EDNRAP25101 427 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 OXTRP30559 389 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 ERVK-16P61578 105 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 POU5F1Q01860 360 aaKnown RBP3.32□□□□□ -1.88
MATR3-223ENST00000514402 FCHO2Q0JRZ9 810 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 SPECC1Q5M775 1068 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 CFAP58Q5T655 872 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 MFN1Q8IWA4 741 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 FBXL16Q8N461 479 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 GBP7Q8N8V2 638 aaPredicted RBP3.32□□□□□ -1.88
MATR3-223ENST00000514402 ERP27Q96DN0 273 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 PGM2Q96G03 612 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 LINC00615Q96LM1 132 aaPredicted RBP3.32□□□□□ -1.88
MATR3-223ENST00000514402 C1orf147Q96MC9 270 aaPredicted RBP3.32□□□□□ -1.88
MATR3-223ENST00000514402 CHCHD5Q9BSY4 110 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 NPHP3Q7Z494 1330 aa3.32□□□□□ -1.88
MATR3-223ENST00000514402 NKX6-3A6NJ46 265 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 G3V2L1 256 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 FIBPO43427 364 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 SPRY1O43609 319 aaPredicted RBP3.31□□□□□ -1.88
MATR3-223ENST00000514402 CYTIPO60759 359 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 MTRF1O75570 445 aaKnown RBP3.31□□□□□ -1.88
MATR3-223ENST00000514402 PSMD10O75832 226 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 MC5RP33032 325 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 SFTPDP35247 375 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 COPB2P35606 906 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 OR1D5P58170 312 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 CACNG1Q06432 222 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 NONOQ15233 471 aaKnown RBP eCLIP3.31□□□□□ -1.88
MATR3-223ENST00000514402 FAM189A2Q15884 450 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 RBBP7Q16576 425 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 PTGISQ16647 500 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 ATP1A1-AS1Q5TC04 95 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 KRT80Q6KB66 452 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 ZNF841Q6ZN19 808 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 KRT74Q7RTS7 529 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 SPSB1Q96BD6 273 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 RAVER2Q9HCJ3 691 aaKnown RBP3.31□□□□□ -1.88
MATR3-223ENST00000514402 HACD3Q9P035 362 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 THAP10Q9P2Z0 257 aaPredicted RBP3.31□□□□□ -1.88
MATR3-223ENST00000514402 FBXL4Q9UKA2 621 aa3.31□□□□□ -1.88
MATR3-223ENST00000514402 TLX2O43763 284 aaPredicted RBP3.3□□□□□ -1.88
MATR3-223ENST00000514402 FYNP06241 537 aa3.3□□□□□ -1.88
MATR3-223ENST00000514402 YES1P07947 543 aa3.3□□□□□ -1.88
MATR3-223ENST00000514402 CD59P13987 128 aa3.3□□□□□ -1.88
MATR3-223ENST00000514402 FOLR2P14207 255 aa3.3□□□□□ -1.88
MATR3-223ENST00000514402 EPORP19235 508 aa3.3□□□□□ -1.88
MATR3-223ENST00000514402 ETV5P41161 510 aa3.3□□□□□ -1.88
MATR3-223ENST00000514402 NDST2P52849 883 aa3.3□□□□□ -1.88
MATR3-223ENST00000514402 TMEM266Q2M3C6 531 aa3.3□□□□□ -1.88
MATR3-223ENST00000514402 FAM174BQ3ZCQ3 159 aa3.3□□□□□ -1.88
MATR3-223ENST00000514402 C16orf54Q6UWD8 224 aa3.3□□□□□ -1.88
MATR3-223ENST00000514402 ENOSF1Q7L5Y1 443 aa3.3□□□□□ -1.88
MATR3-223ENST00000514402 CPEB2Q7Z5Q1 589 aaKnown RBP3.3□□□□□ -1.88
MATR3-223ENST00000514402 RNF130Q86XS8 419 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms