RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 TMEM184CQ9NVA4 438 aa11.55□□□□□ -0.56
SNHG4-208ENST00000514110 HCN3Q9P1Z3 774 aa11.55□□□□□ -0.56
SNHG4-208ENST00000514110 PDE10AQ9Y233 779 aa11.55□□□□□ -0.56
SNHG4-208ENST00000514110 COMMD10Q9Y6G5 202 aa11.55□□□□□ -0.56
SNHG4-208ENST00000514110 CNTRLQ7Z7A1 2325 aa11.55□□□□□ -0.56
SNHG4-208ENST00000514110 ZGRF1Q86YA3 2104 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 MYO9AB2RTY4 2548 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 KCNE1BA0A087WTH5 132 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 FEZF1A0PJY2 475 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 H0YIG0 161 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 SGK494L7N484 410 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 LCMT2O60294 686 aaKnown RBP11.54□□□□□ -0.56
SNHG4-208ENST00000514110 ICAM2P13598 275 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 IL1RNP18510 177 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 MST1P26927 711 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 BCL6P41182 706 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 RPS15AP62244 130 aaKnown RBP11.54□□□□□ -0.56
SNHG4-208ENST00000514110 CSNK1G2P78368 415 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 INAQ16352 499 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 MFSD4BQ5TF39 518 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 ABHD17BQ5VST6 288 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 TMEM214Q6NUQ4 689 aaKnown RBP11.54□□□□□ -0.56
SNHG4-208ENST00000514110 CCDC137Q6PK04 289 aaKnown RBP11.54□□□□□ -0.56
SNHG4-208ENST00000514110 GFRALQ6UXV0 394 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 CPEB2Q7Z5Q1 589 aaKnown RBP11.54□□□□□ -0.56
SNHG4-208ENST00000514110 LMNTD2Q8IXW0 634 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 OR51Q1Q8NH59 317 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 CALML6Q8TD86 181 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 METTL21AQ8WXB1 218 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 RELTQ969Z4 430 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 TM4SF19Q96DZ7 209 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 CCDC138Q96M89 665 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 NDNQ99608 321 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 IARS2Q9NSE4 1012 aaKnown RBP11.54□□□□□ -0.56
SNHG4-208ENST00000514110 STMN3Q9NZ72 180 aa11.54□□□□□ -0.56
SNHG4-208ENST00000514110 ARHGAP10A1A4S6 786 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 OR5H15A6NDH6 313 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 A8MUI8 341 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 EIF3FO00303 357 aaPredicted RBP11.53□□□□□ -0.56
SNHG4-208ENST00000514110 WISP2O76076 250 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 RASAL1O95294 804 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 PRF1P14222 555 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 HRH2P25021 359 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 GABRB3P28472 473 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 XCR1P46094 333 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 AP2B1P63010 937 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 PMP22Q01453 160 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 ZNF33BQ06732 778 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 NAE1Q13564 534 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 BTBD16Q32M84 506 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 MINDY4Q4G0A6 757 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 FCRLBQ6BAA4 426 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 PLAG1Q6DJT9 500 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 AGTRAPQ6RW13 159 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 ANKRD37Q7Z713 158 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 SLC26A11Q86WA9 606 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 PDSS2Q86YH6 399 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 SLC34A3Q8N130 599 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.53□□□□□ -0.568e-81■■□□□ 11.7
SNHG4-208ENST00000514110 KCT2Q8NC54 265 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 C2CD4AQ8NCU7 369 aaPredicted RBP11.53□□□□□ -0.56
SNHG4-208ENST00000514110 ZCCHC10Q8TBK6 192 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 MCOLN3Q8TDD5 553 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 MARVELD3Q96A59 401 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 ALKBH8Q96BT7 664 aaKnown RBP11.53□□□□□ -0.56
SNHG4-208ENST00000514110 THAP11Q96EK4 314 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 PBKQ96KB5 322 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 FAM167BQ9BTA0 163 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 PCBD2Q9H0N5 130 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 ATG10Q9H0Y0 220 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 ABI3Q9P2A4 366 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 TRMT6Q9UJA5 497 aaKnown RBP11.53□□□□□ -0.56
SNHG4-208ENST00000514110 ENTPD4Q9Y227 616 aa11.53□□□□□ -0.56
SNHG4-208ENST00000514110 SVILO95425 2214 aa11.52□□□□□ -0.56
SNHG4-208ENST00000514110 DIDO1Q9BTC0 2240 aaKnown RBP11.52□□□□□ -0.56
SNHG4-208ENST00000514110 PRAMEF2O60811 474 aa11.52□□□□□ -0.57
SNHG4-208ENST00000514110 RDH16O75452 317 aa11.52□□□□□ -0.57
SNHG4-208ENST00000514110 BANF1O75531 89 aa11.52□□□□□ -0.57
SNHG4-208ENST00000514110 UNC5CO95185 931 aa11.52□□□□□ -0.57
SNHG4-208ENST00000514110 C8GP07360 202 aa11.52□□□□□ -0.57
SNHG4-208ENST00000514110 CYC1P08574 325 aa11.52□□□□□ -0.57
SNHG4-208ENST00000514110 CDH1P12830 882 aa11.52□□□□□ -0.57
SNHG4-208ENST00000514110 PGAM1P18669 254 aa11.52□□□□□ -0.57
SNHG4-208ENST00000514110 ST13P50502 369 aaKnown RBP11.52□□□□□ -0.57
SNHG4-208ENST00000514110 CDKN2DP55273 166 aa11.52□□□□□ -0.57
SNHG4-208ENST00000514110 PTK6Q13882 451 aa11.52□□□□□ -0.57
SNHG4-208ENST00000514110 CRYMQ14894 314 aa11.52□□□□□ -0.57
SNHG4-208ENST00000514110 PHKG1Q16816 387 aa11.52□□□□□ -0.57
SNHG4-208ENST00000514110 ZXDCQ2QGD7 858 aaPredicted RBP11.52□□□□□ -0.57
SNHG4-208ENST00000514110 RBM20Q5T481 1227 aaKnown RBP11.52□□□□□ -0.57
SNHG4-208ENST00000514110 RNASEH2BQ5TBB1 312 aaKnown RBP11.52□□□□□ -0.57
SNHG4-208ENST00000514110 SP5Q6BEB4 398 aaPredicted RBP11.52□□□□□ -0.57
SNHG4-208ENST00000514110 CAPN13Q6MZZ7 669 aaPredicted RBP11.52□□□□□ -0.57
SNHG4-208ENST00000514110 H3F3CQ6NXT2 135 aa11.52□□□□□ -0.57
SNHG4-208ENST00000514110 PAQR3Q6TCH7 311 aa11.52□□□□□ -0.57
SNHG4-208ENST00000514110 LCTLQ6UWM7 567 aa11.52□□□□□ -0.57
SNHG4-208ENST00000514110 TMEM207Q6UWW9 146 aa11.52□□□□□ -0.57
SNHG4-208ENST00000514110 ASPGQ86U10 573 aa11.52□□□□□ -0.57
SNHG4-208ENST00000514110 C17orf64Q86WR6 236 aa11.52□□□□□ -0.57
SNHG4-208ENST00000514110 PPIL6Q8IXY8 311 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms