RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 TSTA3Q13630 321 aaPredicted RBP9.85□□□□□ -0.83
CLDND1-227ENST00000513452 PTK6Q13882 451 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 KEAP1Q14145 624 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 FAM53BQ14153 422 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 USP10Q14694 798 aaKnown RBP9.85□□□□□ -0.83
CLDND1-227ENST00000513452 NR1I3Q14994 352 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 ABRAXAS2Q15018 415 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 SLC18A3Q16572 532 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 NDUFA9Q16795 377 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 CCDC38Q502W7 563 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 PRSS41Q7RTY9 318 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 PAQR7Q86WK9 346 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 RPS19BP1Q86WX3 136 aaKnown RBP9.85□□□□□ -0.83
CLDND1-227ENST00000513452 SULF2Q8IWU5 870 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 KRT222Q8N1A0 295 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 OR5M9Q8NGP3 310 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 OR51Q1Q8NH59 317 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 GSDMBQ8TAX9 411 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 OR2A5Q96R48 311 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 LPAR4Q99677 370 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 FERMT1Q9BQL6 677 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 HEMGNQ9BXL5 484 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 RBCK1Q9BYM8 510 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 ZNF395Q9H8N7 513 aaPredicted RBP9.85□□□□□ -0.83
CLDND1-227ENST00000513452 PLSCR2Q9NRY7 297 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 PCYOX1Q9UHG3 505 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 TSR3Q9UJK0 312 aaKnown RBP9.85□□□□□ -0.83
CLDND1-227ENST00000513452 CAPN11Q9UMQ6 739 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 ATRQ13535 2644 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 FAM171A2A8MVW0 826 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 NPIPA2E9PIF3 369 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 NPIPA3F8WFD2 350 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 APOC4-APOC2K7ER74 178 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 TXNDC9O14530 226 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 PSTPIP1O43586 416 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 PEX1O43933 1283 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 CDC123O75794 336 aaPredicted RBP9.84□□□□□ -0.83
CLDND1-227ENST00000513452 APOC2P02655 101 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 EZRP15311 586 aaKnown RBP9.84□□□□□ -0.83
CLDND1-227ENST00000513452 AOAHP28039 575 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 RPA3P35244 121 aaPredicted RBP9.84□□□□□ -0.83
CLDND1-227ENST00000513452 SLC1A1P43005 524 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 ZFP36L2P47974 494 aaKnown RBP9.84□□□□□ -0.83
CLDND1-227ENST00000513452 MARCKSL1P49006 195 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 SLC26A5P58743 744 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 GPR85P60893 370 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 NSDHLQ15738 373 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 CCDC181Q5TID7 509 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 FBXW10Q5XX13 1052 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 SUSD1Q6UWL2 747 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 BBS12Q6ZW61 710 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 KRTAP1-3Q8IUG1 177 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 PLD3Q8IV08 490 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 CDKL3Q8IVW4 592 aaPredicted RBP9.84□□□□□ -0.83
CLDND1-227ENST00000513452 OR52N2Q8NGI0 321 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 PPP1R2P1Q96PQ5 205 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 TTC1Q99614 292 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 FAM118BQ9BPY3 351 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 ANP32EQ9BTT0 268 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 CARD6Q9BX69 1037 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 NAT10Q9H0A0 1025 aaKnown RBP9.84□□□□□ -0.83
CLDND1-227ENST00000513452 DEFB127Q9H1M4 99 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 PNPLA3Q9NST1 481 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 SPATA7Q9P0W8 599 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 TAC3Q9UHF0 121 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 R3HDM2Q9Y2K5 976 aaKnown RBP9.84□□□□□ -0.83
CLDND1-227ENST00000513452 MRFAP1Q9Y605 127 aa9.84□□□□□ -0.83
CLDND1-227ENST00000513452 RTTNQ86VV8 2226 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 A0A0G2JNJ9 132 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 MROH6A6NGR9 719 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 ARHGEF33A8MVX0 844 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 H0YIG0 161 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 KLRC4-KLRK1H3BQV0 150 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 HAT1O14929 419 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 NSA2O95478 260 aaKnown RBP9.83□□□□□ -0.84
CLDND1-227ENST00000513452 GOT2P00505 430 aaKnown RBP9.83□□□□□ -0.84
CLDND1-227ENST00000513452 GYPCP04921 128 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 PKMP14618 531 aaKnown RBP9.83□□□□□ -0.84
CLDND1-227ENST00000513452 IL1RNP18510 177 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 ACVR2AP27037 513 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 UQCRC1P31930 480 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 CCNFP41002 786 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 HLCSP50747 726 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 MLF1P58340 268 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 SEMA3AQ14563 771 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 SLC25A35Q3KQZ1 300 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 FLYWCH1Q4VC44 716 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 ZNF425Q6IV72 752 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 AFTPHQ6ULP2 937 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 CHSY3Q70JA7 882 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 WDR53Q7Z5U6 358 aaPredicted RBP9.83□□□□□ -0.84
CLDND1-227ENST00000513452 ADCK2Q7Z695 626 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 LIX1LQ8IVB5 337 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 RHOT2Q8IXI1 618 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 C16orf52Q8NHV5 167 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 ACTL9Q8TC94 416 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 TSLPQ969D9 159 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 TTYH2Q9BSA4 534 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 ATG10Q9H0Y0 220 aa9.83□□□□□ -0.84
CLDND1-227ENST00000513452 TRIM45Q9H8W5 580 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms