RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 CDC7O00311 574 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 ENPP3O14638 875 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 STX16O14662 325 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 LCKP06239 509 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 GGT1P19440 569 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 PRPS1L1P21108 318 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 PTGER3P43115 390 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 NPRL3Q12980 569 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 PGBD2Q6P3X8 592 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 PM20D2Q8IYS1 436 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 TOMM5Q8N4H5 51 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 Q8N9G6 341 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-211ENST00000513346 CHDHQ8NE62 594 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-211ENST00000513346 C2orf15Q8WU43 125 aaKnown RBP10.93□□□□□ -0.66
TCOF1-211ENST00000513346 ING5Q8WYH8 240 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 TMEM125Q96AQ2 219 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 LRCH3Q96II8 777 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 CEP295NLQ96MC4 621 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 FCRL4Q96PJ5 515 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 ZIC5Q96T25 663 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 AARSD1Q9BTE6 412 aaKnown RBP10.93□□□□□ -0.66
TCOF1-211ENST00000513346 MS4A12Q9NXJ0 267 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 MAP4K5Q9Y4K4 846 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 STRCP1A6NGW2 1772 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 MYO7AQ13402 2215 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 NME6O75414 186 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-211ENST00000513346 F2P00734 622 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 ANXA3P12429 323 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 F8A1P23610 371 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 BUD31P41223 144 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-211ENST00000513346 WASP42768 502 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 RPIAP49247 311 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 HEPACAMQ14CZ8 416 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 CHST9Q7L1S5 443 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 MAVSQ7Z434 540 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 SPRED1Q7Z699 444 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 MARCH9Q86YJ5 346 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 PLCZ1Q86YW0 608 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 ZBTB2Q8N680 514 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 SRFBP1Q8NEF9 429 aaKnown RBP10.93□□□□□ -0.66
TCOF1-211ENST00000513346 FRS2Q8WU20 508 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 ARNTL2Q8WYA1 636 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 TXNDC15Q96J42 360 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 DERL2Q9GZP9 239 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 SLC6A15Q9H2J7 730 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 MAGIXQ9H6Y5 334 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 KCTD5Q9NXV2 234 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 SAGE1Q9NXZ1 904 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 ZFP37Q9Y6Q3 630 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-211ENST00000513346 TIAM2Q8IVF5 1701 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 STSP08842 583 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 ITPKAP23677 461 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 GUCA1AP43080 201 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-211ENST00000513346 IRF5Q13568 498 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 CYBRD1Q53TN4 286 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 CLEC20AQ6ZU45 233 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 ZSWIM9Q86XI8 627 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 CRYBG2Q8N1P7 616 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 TMEM80Q96HE8 168 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 EBPLQ9BY08 206 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 IL1RAPQ9NPH3 570 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 HSFX1Q9UBD0 423 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 PTGDR2Q9Y5Y4 395 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 ZCWPW2A0A1B0GU75 182 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 LCHNA4D1U4 455 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 FFAR2O15552 330 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 EPHX1P07099 455 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 EFNA1P20827 205 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-211ENST00000513346 LCN1P31025 176 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 CACNG1Q06432 222 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 ZNF33AQ06730 810 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 INCA1Q0VD86 236 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 SELPLGQ14242 412 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 ADNP2Q6IQ32 1131 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 ENPP6Q6UWR7 440 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 LINC00299Q6ZSB3 139 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 MUL1Q969V5 352 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 COL26A1Q96A83 441 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 SPACA7Q96KW9 195 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 DUSP26Q9BV47 211 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 XYLT2Q9H1B5 865 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 COQ3Q9NZJ6 369 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 PCDHGC4Q9Y5F7 938 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 SEC14L2O76054 403 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 TLX1P31314 330 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-211ENST00000513346 CA5AP35218 305 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 XKP51811 444 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 DHRS4L2Q6PKH6 230 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 CIR1Q86X95 450 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-211ENST00000513346 OR4F6Q8NGB9 312 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 OR13C4Q8NGS5 318 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 MAELQ96JY0 434 aaKnown RBP10.92□□□□□ -0.66
TCOF1-211ENST00000513346 MNTQ99583 582 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 RNF121Q9H920 327 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 SGK2Q9HBY8 427 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 SDR39U1Q9NRG7 319 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-211ENST00000513346 ABCB8Q9NUT2 735 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 SOHLH2Q9NX45 425 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 MAT2BQ9NZL9 334 aa10.92□□□□□ -0.66
TCOF1-211ENST00000513346 ZNF282Q9UDV7 671 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms