RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	LHX5	Q9H2C1	402 aa		5.2	□□□□□ -1.58
MATR3-218	ENST00000511978	LINC00597	Q9H2U6	94 aa		5.2	□□□□□ -1.58
MATR3-218	ENST00000511978	OLA1	Q9NTK5	396 aa	Known RBP	5.2	□□□□□ -1.58
MATR3-218	ENST00000511978	IRAK4	Q9NWZ3	460 aa		5.2	□□□□□ -1.58
MATR3-218	ENST00000511978	CISD1	Q9NZ45	108 aa	Known RBP	5.2	□□□□□ -1.58
MATR3-218	ENST00000511978	DLGAP2	Q9P1A6	1054 aa		5.2	□□□□□ -1.58
MATR3-218	ENST00000511978	NOCT	Q9UK39	431 aa	Known RBP	5.2	□□□□□ -1.58
MATR3-218	ENST00000511978	LSM7	Q9UK45	103 aa	Known RBP	5.2	□□□□□ -1.58
MATR3-218	ENST00000511978	INTS6	Q9UL03	887 aa	Known RBP	5.2	□□□□□ -1.58
MATR3-218	ENST00000511978	FAM170A	A1A519	330 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	TTC36	A6NLP5	189 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	LRRC53	A6NM62	1247 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	USP17L23	D6RBM5	183 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	TRDMT1	O14717	391 aa	Known RBP	5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	PAPSS1	O43252	624 aa	Predicted RBP	5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	HSPA12A	O43301	675 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	SEC14L2	O76054	403 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	LSM8	O95777	96 aa	Known RBP	5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	EGF	P01133	1207 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	CLEC3B	P05452	202 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	HMBS	P08397	361 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	ACAA1	P09110	424 aa	Predicted RBP	5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	CD53	P19397	219 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	C21orf33	P30042	268 aa	Predicted RBP	5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	CORO1A	P31146	461 aa	Known RBP	5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	CDA	P32320	146 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	CDH5	P33151	784 aa	Predicted RBP	5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	RPL3	P39023	403 aa	Known RBP	5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	OPRD1	P41143	372 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	COG7	P83436	770 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	CDR2	Q01850	454 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	BNC1	Q01954	994 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	KDSR	Q06136	332 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	GRSF1	Q12849	480 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	FOXD4	Q12950	439 aa	Predicted RBP	5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	ANGPT1	Q15389	498 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	PTPN20	Q4JDL3	420 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	FILIP1L	Q4L180	1135 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	LCE1A	Q5T7P2	110 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	TYW3	Q6IPR3	259 aa	Known RBP	5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	KLHL24	Q6TFL4	600 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	LCTL	Q6UWM7	567 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978		Q6ZS52	159 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	FAM183BP	Q6ZVS7	135 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	LINGO2	Q7L985	606 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	SHF	Q7M4L6	423 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	CACNA2D4	Q7Z3S7	1137 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	TMEM110	Q86TL2	294 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	TAC4	Q86UU9	113 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	WDTC1	Q8N5D0	677 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	TMEM35B	Q8NCS4	154 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	DQX1	Q8TE96	717 aa	Known RBP	5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	RNF139	Q8WU17	664 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	FAM216A	Q8WUB2	273 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	SLC20A1	Q8WUM9	679 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	NEUROG1	Q92886	237 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	CD101	Q93033	1021 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	EXOC4	Q96A65	974 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	CLDN23	Q96B33	292 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	TXNDC15	Q96J42	360 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	PIWIL1	Q96J94	861 aa	Known RBP	5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	PPP1R13B	Q96KQ4	1090 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	LRFN5	Q96NI6	719 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	TRIM62	Q9BVG3	475 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	PDCL3	Q9H2J4	239 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	TSPY26P	Q9H489	355 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	SYNC	Q9H7C4	482 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	LMAN1L	Q9HAT1	526 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	BPIFA1	Q9NP55	256 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	MKKS	Q9NPJ1	570 aa	Predicted RBP	5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	PRMT8	Q9NR22	394 aa	Predicted RBP	5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	ABCC13	Q9NSE7	274 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	PAM16	Q9Y3D7	125 aa		5.19	□□□□□ -1.58
MATR3-218	ENST00000511978	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	NEDD8-MDP1	E9PL57	170 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	GOLGA6L19	H0YKK7	550 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	CAPN9	O14815	690 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	CACNG3	O60359	315 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	KCNJ13	O60928	360 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	HSF2BP	O75031	334 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	DAB1	O75553	588 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	SERPINI2	O75830	405 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	CH25H	O95992	272 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	IGLV3-27	P01718	113 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	FYN	P06241	537 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	TNFAIP3	P21580	790 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	CCR3	P51677	355 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	SNX16	P57768	344 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	RPL7A	P62424	266 aa	Known RBP	5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	TRAF2	Q12933	501 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	DCTN2	Q13561	401 aa	Known RBP	5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	FGFBP1	Q14512	234 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	TBCE	Q15813	527 aa	Predicted RBP	5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	EFHC1	Q5JVL4	640 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	SYPL2	Q5VXT5	272 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	HIST2H2BC	Q6DN03	193 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	HIST2H2BD	Q6DRA6	164 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	OR6B2	Q6IFH4	312 aa		5.18	□□□□□ -1.58
MATR3-218	ENST00000511978	RHBDF2	Q6PJF5	856 aa		5.18	□□□□□ -1.58

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