RNA–Protein interactions for RNA: ENST00000511812.5

SMN2-210, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2 BASIC

Gene SMN2, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-210ENST00000511812 ATP13A2Q9NQ11 1180 aa16.04■□□□□ 0.16
SMN2-210ENST00000511812 ZDHHC18Q9NUE0 388 aa16.04■□□□□ 0.16
SMN2-210ENST00000511812 KCNE2Q9Y6J6 123 aa16.04■□□□□ 0.16
SMN2-210ENST00000511812 MDC1Q14676 2089 aaKnown RBP16.03■□□□□ 0.16
SMN2-210ENST00000511812 CCDC88CQ9P219 2028 aa16.03■□□□□ 0.16
SMN2-210ENST00000511812 OR1F1O43749 312 aa16.03■□□□□ 0.16
SMN2-210ENST00000511812 CEACAM4O75871 244 aa16.03■□□□□ 0.16
SMN2-210ENST00000511812 CASRP41180 1078 aa16.03■□□□□ 0.16
SMN2-210ENST00000511812 BCL6P41182 706 aa16.03■□□□□ 0.16
SMN2-210ENST00000511812 KLC1Q07866 573 aa16.03■□□□□ 0.16
SMN2-210ENST00000511812 ZXDCQ2QGD7 858 aaPredicted RBP16.03■□□□□ 0.16
SMN2-210ENST00000511812 VWA2Q5GFL6 755 aa16.03■□□□□ 0.16
SMN2-210ENST00000511812 IRAK1BP1Q5VVH5 260 aa16.03■□□□□ 0.16
SMN2-210ENST00000511812 VN1R4Q7Z5H5 301 aa16.03■□□□□ 0.16
SMN2-210ENST00000511812 TCAIMQ8N3R3 496 aa16.03■□□□□ 0.16
SMN2-210ENST00000511812 GALNT16Q8N428 558 aa16.03■□□□□ 0.16
SMN2-210ENST00000511812 SPATA6LQ8N4H0 392 aa16.03■□□□□ 0.16
SMN2-210ENST00000511812 CEP112Q8N8E3 955 aa16.03■□□□□ 0.16
SMN2-210ENST00000511812 NOA1Q8NC60 698 aaKnown RBP16.03■□□□□ 0.16
SMN2-210ENST00000511812 TSNARE1Q96NA8 513 aa16.03■□□□□ 0.16
SMN2-210ENST00000511812 OR4K3Q96R72 315 aa16.03■□□□□ 0.16
SMN2-210ENST00000511812 C14orf105Q9NVL8 296 aa16.03■□□□□ 0.16
SMN2-210ENST00000511812 DMGDHQ9UI17 866 aaKnown RBP16.03■□□□□ 0.16
SMN2-210ENST00000511812 C3orf18Q9UK00 162 aa16.03■□□□□ 0.16
SMN2-210ENST00000511812 SLC22A14Q9Y267 594 aa16.03■□□□□ 0.16
SMN2-210ENST00000511812 MAP4K5Q9Y4K4 846 aa16.03■□□□□ 0.16
SMN2-210ENST00000511812 TRBC2A0A5B9 178 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 NCF1BA6NI72 391 aaPredicted RBP16.02■□□□□ 0.16
SMN2-210ENST00000511812 NCF1CA8MVU1 366 aaPredicted RBP16.02■□□□□ 0.16
SMN2-210ENST00000511812 FOXS1O43638 330 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 LCMT2O60294 686 aaKnown RBP16.02■□□□□ 0.16
SMN2-210ENST00000511812 FAM155BO75949 473 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 WDR47O94967 919 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 C1QAP02745 245 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 S100BP04271 92 aaPredicted RBP16.02■□□□□ 0.16
SMN2-210ENST00000511812 ALPPP05187 535 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 SERPIND1P05546 499 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 NCF1P14598 390 aaPredicted RBP16.02■□□□□ 0.16
SMN2-210ENST00000511812 CXCR2P25025 360 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 SLC26A3P40879 764 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 MEF2AQ02078 507 aaPredicted RBP16.02■□□□□ 0.16
SMN2-210ENST00000511812 AIMP2Q13155 320 aaKnown RBP16.02■□□□□ 0.16
SMN2-210ENST00000511812 RAPSNQ13702 412 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 TGFBIQ15582 683 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 ZKSCAN8Q15776 578 aaPredicted RBP16.02■□□□□ 0.16
SMN2-210ENST00000511812 UAP1Q16222 522 aaPredicted RBP16.02■□□□□ 0.16
SMN2-210ENST00000511812 TUBB8Q3ZCM7 444 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 CATSPEREQ5SY80 951 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 TMPRSS11BQ86T26 416 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 TBC1D1Q86TI0 1168 aaPredicted RBP16.02■□□□□ 0.16
SMN2-210ENST00000511812 GPSM1Q86YR5 675 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 HPS6Q86YV9 775 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 OR4K1Q8NGD4 311 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 ZCCHC10Q8TBK6 192 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 NEIL2Q969S2 332 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 MRRFQ96E11 262 aaKnown RBP16.02■□□□□ 0.16
SMN2-210ENST00000511812 CYTH2Q99418 400 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 FMO2Q99518 471 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 MACROD1Q9BQ69 325 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 AIF1LQ9BQI0 150 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 TRIM4Q9C037 500 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 PELI2Q9HAT8 420 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 ANKHQ9HCJ1 492 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 MLXIPLQ9NP71 852 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 WWOXQ9NZC7 414 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 FBXL4Q9UKA2 621 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 HS3ST3B1Q9Y662 390 aa16.02■□□□□ 0.16
SMN2-210ENST00000511812 MED13Q9UHV7 2174 aa16.02■□□□□ 0.15
SMN2-210ENST00000511812 CFAP46Q8IYW2 2715 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 IGLV3-12A0A075B6K2 115 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 H0YIG0 161 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 MAP2K7O14733 419 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 FFAR3O14843 346 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 GPR42O15529 346 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 NDUFS4O43181 175 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 DPM1O60762 260 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 H2AFYO75367 372 aaKnown RBP16.01■□□□□ 0.15
SMN2-210ENST00000511812 WISP3O95389 354 aaPredicted RBP16.01■□□□□ 0.15
SMN2-210ENST00000511812 NSA2O95478 260 aaKnown RBP16.01■□□□□ 0.15
SMN2-210ENST00000511812 PDGFAP04085 211 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 HEXBP07686 556 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 CD1DP15813 335 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 ITGA3P26006 1051 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 CRABP2P29373 138 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 EMP2P54851 167 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 SKP1P63208 163 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 TLE1Q04724 770 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 RGS1Q08116 209 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 EFTUD2Q15029 972 aaKnown RBP eCLIP16.01■□□□□ 0.15
SMN2-210ENST00000511812 TMEM214Q6NUQ4 689 aaKnown RBP16.01■□□□□ 0.15
SMN2-210ENST00000511812 NXPE4Q6UWF7 544 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 TMEM151BQ8IW70 566 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 AMER3Q8N944 861 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 OR9A4Q8NGU2 314 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 RHBDF1Q96CC6 855 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 TM4SF19Q96DZ7 209 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 SARGQ9BW04 601 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 NUDT9Q9BW91 350 aa16.01■□□□□ 0.15
SMN2-210ENST00000511812 CNOT10Q9H9A5 744 aaKnown RBP16.01■□□□□ 0.15
SMN2-210ENST00000511812 CD274Q9NZQ7 290 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms