RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 GRK3P35626 688 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 SLC6A12P48065 614 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 GLRBP48167 497 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 HSPA7P48741 367 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 HNMTP50135 292 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 KCNAB2Q13303 367 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 ATP1A4Q13733 1029 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 NXPE4Q6UWF7 544 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 ASPGQ86U10 573 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 CENPLQ8N0S6 344 aaPredicted RBP13.3□□□□□ -0.28
DDX41-212ENST00000511040 ARHGEF39Q8N4T4 335 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 SNX31Q8N9S9 440 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 OR4K1Q8NGD4 311 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 OR2Y1Q8NGV0 311 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 ZCCHC10Q8TBK6 192 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 DCAKDQ8WVC6 231 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 FKBP10Q96AY3 582 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 MOCOSQ96EN8 888 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 YIPF2Q9BWQ6 316 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 TRIM55Q9BYV6 548 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 KCNE1BA0A087WTH5 132 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 EXOC1LA0A1B0GW35 172 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 TRBC2A0A5B9 178 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 MASP2O00187 686 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 TXNDC9O14530 226 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 RIPK2O43353 540 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 FOXS1O43638 330 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 ONECUT2O95948 504 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 AGTR2P50052 363 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 CSRP3P50461 194 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 EMP3P54852 163 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 MAT1AQ00266 395 aaKnown RBP13.29□□□□□ -0.28
DDX41-212ENST00000511040 REEP5Q00765 189 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 NKG7Q16617 165 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 SYT16Q17RD7 645 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 SULT1C3Q6IMI6 304 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 PRMT9Q6P2P2 845 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 TRMT10CQ7L0Y3 403 aaKnown RBP13.29□□□□□ -0.28
DDX41-212ENST00000511040 PRSS41Q7RTY9 318 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 PPP1R32Q7Z5V6 425 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 MRGPREQ86SM8 312 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 RAB43Q86YS6 212 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 TCAIMQ8N3R3 496 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 ZNF843Q8N446 348 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 KCT2Q8NC54 265 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 CAMKVQ8NCB2 501 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 STAG3L4Q8TBR4 150 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 SLC13A3Q8WWT9 602 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 THAP4Q8WY91 577 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 THAP11Q96EK4 314 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 MMABQ96EY8 250 aaPredicted RBP13.29□□□□□ -0.28
DDX41-212ENST00000511040 TXLNGYQ9BZA5 131 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 FAM117AQ9C073 453 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 DRC3Q9H069 523 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 PELI2Q9HAT8 420 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 ZNF71Q9NQZ8 489 aaPredicted RBP13.29□□□□□ -0.28
DDX41-212ENST00000511040 GEMIN8Q9NWZ8 242 aaKnown RBP13.29□□□□□ -0.28
DDX41-212ENST00000511040 TRPC4Q9UBN4 977 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 ASB1Q9Y576 335 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 KCNE2Q9Y6J6 123 aa13.29□□□□□ -0.28
DDX41-212ENST00000511040 TRIM49D1C9J1S8 452 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 NDUFS4O43181 175 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 CCNT2O60583 730 aaKnown RBP13.28□□□□□ -0.28
DDX41-212ENST00000511040 KERAO60938 352 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 ABHD2P08910 425 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 CD63P08962 238 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 IL1RNP18510 177 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 SERPINB9P50453 376 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 CCL11P51671 97 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 NFATC3Q12968 1075 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 CDC16Q13042 620 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 SSPNQ14714 243 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 RBBP5Q15291 538 aaKnown RBP13.28□□□□□ -0.28
DDX41-212ENST00000511040 NDUFA9Q16795 377 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 VWA2Q5GFL6 755 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 GARNL3Q5VVW2 1013 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 SLCO4C1Q6ZQN7 724 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 TAOK1Q7L7X3 1001 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 KLHDC8AQ8IYD2 350 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 SHISA5Q8N114 240 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 PLD6Q8N2A8 252 aaKnown RBP13.28□□□□□ -0.28
DDX41-212ENST00000511040 AMER3Q8N944 861 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 PDPRQ8NCN5 879 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 OR9A4Q8NGU2 314 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 TM4SF19Q96DZ7 209 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 ATOH8Q96SQ7 321 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 SPSB2Q99619 263 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 AIF1LQ9BQI0 150 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 ADNPQ9H2P0 1102 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 DNAJC11Q9NVH1 559 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 NUDT4Q9NZJ9 180 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 PTBP2Q9UKA9 531 aaKnown RBP13.28□□□□□ -0.28
DDX41-212ENST00000511040 CDC14AQ9UNH5 594 aa13.28□□□□□ -0.28
DDX41-212ENST00000511040 A6NL46 340 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 VSTM2BA6NLU5 285 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 K7EM74 188 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 SGK494L7N484 410 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 ZNF500O60304 480 aaPredicted RBP13.27□□□□□ -0.29
DDX41-212ENST00000511040 RFPL1O75677 317 aa13.27□□□□□ -0.29
DDX41-212ENST00000511040 STK16O75716 305 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms