RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 NAA30Q147X3 362 aaPredicted RBP16.46■□□□□ 0.23
CLDND1-221ENST00000510541 SLCO4C1Q6ZQN7 724 aa16.46■□□□□ 0.23
CLDND1-221ENST00000510541 TRPV3Q8NET8 790 aa16.46■□□□□ 0.23
CLDND1-221ENST00000510541 OR2Y1Q8NGV0 311 aa16.46■□□□□ 0.23
CLDND1-221ENST00000510541 CAVIN3Q969G5 261 aa16.46■□□□□ 0.23
CLDND1-221ENST00000510541 PYCR2Q96C36 320 aa16.46■□□□□ 0.23
CLDND1-221ENST00000510541 C10orf90Q96M02 699 aa16.46■□□□□ 0.23
CLDND1-221ENST00000510541 AIF1LQ9BQI0 150 aa16.46■□□□□ 0.23
CLDND1-221ENST00000510541 TMEM79Q9BSE2 394 aa16.46■□□□□ 0.23
CLDND1-221ENST00000510541 CD244Q9BZW8 370 aa16.46■□□□□ 0.23
CLDND1-221ENST00000510541 ACTL8Q9H568 366 aa16.46■□□□□ 0.23
CLDND1-221ENST00000510541 SLC22A11Q9NSA0 550 aa16.46■□□□□ 0.23
CLDND1-221ENST00000510541 DNAJC11Q9NVH1 559 aa16.46■□□□□ 0.23
CLDND1-221ENST00000510541 ZFP69BQ9UJL9 534 aa16.46■□□□□ 0.23
CLDND1-221ENST00000510541 RAB21Q9UL25 225 aa16.46■□□□□ 0.23
CLDND1-221ENST00000510541 RFPL1O75677 317 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 NSA2O95478 260 aaKnown RBP16.45■□□□□ 0.22
CLDND1-221ENST00000510541 S100BP04271 92 aaPredicted RBP16.45■□□□□ 0.22
CLDND1-221ENST00000510541 CTSBP07858 339 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 GSTA1P08263 222 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 C1GALT1C1LP0DN25 315 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 ITGAXP20702 1163 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 IL10P22301 178 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 SKP1P63208 163 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 SRSF6Q13247 344 aaKnown RBP16.45■□□□□ 0.22
CLDND1-221ENST00000510541 LAPTM5Q13571 262 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 TSTA3Q13630 321 aaPredicted RBP16.45■□□□□ 0.22
CLDND1-221ENST00000510541 BMPR2Q13873 1038 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 DSG2Q14126 1118 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 PCBP2Q15366 365 aaKnown RBP eCLIP16.45■□□□□ 0.22
CLDND1-221ENST00000510541 UAP1Q16222 522 aaPredicted RBP16.45■□□□□ 0.22
CLDND1-221ENST00000510541 TECRLQ5HYJ1 363 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 TMEM214Q6NUQ4 689 aaKnown RBP16.45■□□□□ 0.22
CLDND1-221ENST00000510541 RIBC1Q8N443 379 aaPredicted RBP16.45■□□□□ 0.22
CLDND1-221ENST00000510541 AFAP1L2Q8N4X5 818 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 MREGQ8N565 214 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 NT5CQ8TCD5 201 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 MZB1Q8WU39 189 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 KCTD4Q8WVF5 259 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 MRPL57Q9BQC6 102 aaKnown RBP16.45■□□□□ 0.22
CLDND1-221ENST00000510541 EFCAB11Q9BUY7 163 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 ALG9Q9H6U8 611 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 CD274Q9NZQ7 290 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 DHCR7Q9UBM7 475 aaKnown RBP16.45■□□□□ 0.22
CLDND1-221ENST00000510541 SH2B3Q9UQQ2 575 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 POLHQ9Y253 713 aa16.45■□□□□ 0.22
CLDND1-221ENST00000510541 RUVBL1Q9Y265 456 aaKnown RBP16.45■□□□□ 0.22
CLDND1-221ENST00000510541 A0A1W2PQ72 361 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 TRIM49D1C9J1S8 452 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 POC1B-GALNT4F8VUJ3 575 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 STX16-NPEPL1H3BU86 382 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 STX16O14662 325 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 NRP2O60462 931 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 WFS1O76024 890 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 WDR47O94967 919 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 SLC35G6P0C7Q6 338 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 SERPINB1P30740 379 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 BCL6P41182 706 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 PIK3CGP48736 1102 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 SETDB1Q15047 1291 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 LCN10Q6JVE6 187 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 FAM199XQ6PEV8 388 aaPredicted RBP16.44■□□□□ 0.22
CLDND1-221ENST00000510541 BORAQ6PGQ7 559 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 TTLL10Q6ZVT0 673 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 ENDOVQ8N8Q3 282 aaKnown RBP16.44■□□□□ 0.22
CLDND1-221ENST00000510541 AENQ8WTP8 325 aaKnown RBP16.44■□□□□ 0.22
CLDND1-221ENST00000510541 PTCD3Q96EY7 689 aaKnown RBP16.44■□□□□ 0.22
CLDND1-221ENST00000510541 C1QTNF3Q9BXJ4 246 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 DRC3Q9H069 523 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 SYNPO2LQ9H987 977 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 ZNF304Q9HCX3 659 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 WWOXQ9NZC7 414 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 IFT80Q9P2H3 777 aaPredicted RBP16.44■□□□□ 0.22
CLDND1-221ENST00000510541 NDOR1Q9UHB4 597 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 MAP4K5Q9Y4K4 846 aa16.44■□□□□ 0.22
CLDND1-221ENST00000510541 URADA6NGE7 173 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 K7EPI3 171 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 LCMT2O60294 686 aaKnown RBP16.43■□□□□ 0.22
CLDND1-221ENST00000510541 CDH16O75309 829 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 H2AFYO75367 372 aaKnown RBP16.43■□□□□ 0.22
CLDND1-221ENST00000510541 SERPINA6P08185 405 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 ARFIP1P53367 373 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 VSNL1P62760 191 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 NFKB2Q00653 900 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 HERC3Q15034 1050 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 PDK4Q16654 411 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 C10orf62Q5T681 223 aaPredicted RBP16.43■□□□□ 0.22
CLDND1-221ENST00000510541 COX15Q7KZN9 410 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 ADCK2Q7Z695 626 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 ASPGQ86U10 573 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 KRT78Q8N1N4 520 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 SPATA6LQ8N4H0 392 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 TMEM151AQ8N4L1 468 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 APOBEC4Q8WW27 367 aaKnown RBP16.43■□□□□ 0.22
CLDND1-221ENST00000510541 SLC13A3Q8WWT9 602 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 UBE2E3Q969T4 207 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 CRELD1Q96HD1 420 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 ROPN1BQ9BZX4 212 aaPredicted RBP16.43■□□□□ 0.22
CLDND1-221ENST00000510541 MRPL46Q9H2W6 279 aaKnown RBP16.43■□□□□ 0.22
CLDND1-221ENST00000510541 RHBGQ9H310 441 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms