RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 GATMP50440 423 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SMSP52788 366 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CRISP1P54107 249 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 PRKAG1P54619 331 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 TAS2R19P59542 299 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 RPS13P62277 151 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 RAB11AP62491 216 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 FOXO4P98177 505 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SPIBQ01892 262 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 PEX6Q13608 980 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 MEF2DQ14814 521 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 RNF151Q2KHN1 245 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 C2orf76Q3KRA6 126 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CYP27C1Q4G0S4 372 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 FAM102AQ5T9C2 384 aaPredicted RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 RIPPLY2Q5TAB7 128 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SWSAP1Q6NVH7 229 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 LLGL2Q6P1M3 1020 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ADGRD1Q6QNK2 874 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ZNF705AQ6ZN79 300 aaPredicted RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 DPY19L4Q7Z388 723 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 TMEM200AQ86VY9 491 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 FOXP4Q8IVH2 680 aaPredicted RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 GID4Q8IVV7 300 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 LSMEM2Q8N112 164 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 BEST3Q8N1M1 668 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 FIBCD1Q8N539 461 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 LSMEM1Q8N8F7 131 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CCDC71LQ8N9Z2 235 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 OR4E2Q8NGC2 313 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 OR4D10Q8NGI6 311 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 OR6T1Q8NGN1 323 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 IFI44Q8TCB0 444 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 STK35Q8TDR2 534 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 METTL2AQ96IZ6 378 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 ZNF594Q96JF6 807 aaPredicted RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 FCRL1Q96LA6 429 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 RNF157Q96PX1 679 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SH2D3AQ9BRG2 576 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CDADC1Q9BWV3 514 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 GPR61Q9BZJ8 451 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SLC6A17Q9H1V8 727 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ERVMER34-1Q9H9K5 563 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SENP2Q9HC62 589 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ENAMQ9NRM1 1142 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 AIG1Q9NVV5 245 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 FAM53CQ9NYF3 392 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 PPIEQ9UNP9 301 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 PPP1R3CQ9UQK1 317 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 GJA3Q9Y6H8 435 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ANKRD34BA5PLL1 514 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ZNF705GA8MUZ8 300 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 ZNF587BE7ETH6 402 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 F5H5P2 479 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 H0YGN5 161 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 K7EPI3 171 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 M0QYV0 167 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 EIF3FO00303 357 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 ZNF185O15231 689 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 B4GAT1O43505 415 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 LYPLA1O75608 230 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 SLC22A3O75751 556 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 SEC14L2O76054 403 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 MT-ND5P03915 603 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 CYBBP04839 570 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 DCNP07585 359 aaKnown RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 ERCC1P07992 297 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 THBS1P07996 1170 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 C1GALT1C1LP0DN25 315 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ERVK-10P10266 1014 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 BCKDHAP12694 445 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 PGAM2P15259 253 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ZNF7P17097 686 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 HIBADHP31937 336 aaKnown RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 CASRP41180 1078 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 TAS2R30P59541 319 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 CXCR4P61073 352 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 DBPQ10586 325 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 RAB31Q13636 194 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 TMEM132DQ14C87 1099 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 IRF4Q15306 451 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 PGS1Q32NB8 556 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ACTBL2Q562R1 376 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 FAM171A1Q5VUB5 890 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 CES3Q6UWW8 571 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 LINGO4Q6UY18 593 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 SPOCD1Q6ZMY3 1216 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 C1orf186Q6ZWK4 172 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 AHSA2Q719I0 299 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 SLC29A4Q7RTT9 530 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ZNF550Q7Z398 422 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 MILR1Q7Z6M3 343 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ADAMTSL2Q86TH1 951 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 GPR180Q86V85 440 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 SLC41A1Q8IVJ1 513 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 APCDD1Q8J025 514 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 SLC39A11Q8N1S5 342 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 TCTEX1D1Q8N7M0 179 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 OR13C3Q8NGS6 347 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms