RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 CSHL1Q14406 222 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 USP10Q14694 798 aaKnown RBP6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 ARHGAP19Q14CB8 494 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 GLE1Q53GS7 698 aaKnown RBP6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 TECRLQ5HYJ1 363 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 CATSPEREQ5SY80 951 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 CPZQ66K79 652 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 ARMC6Q6NXE6 501 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 C6orf15Q6UXA7 325 aaPredicted RBP6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 VN1R5Q7Z5H4 357 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 TMEM126BQ8IUX1 230 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 MCATQ8IVS2 390 aaKnown RBP6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 PALM2Q8IXS6 379 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 SYTL1Q8IYJ3 562 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 ZNF655Q8N720 491 aaPredicted RBP6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 EXD3Q8N9H8 876 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 PDPRQ8NCN5 879 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 MNS1Q8NEH6 495 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 ADAMTS17Q8TE56 1095 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 SMPDL3AQ92484 453 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 STARD8Q92502 1023 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 MOCOSQ96EN8 888 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 EAF1Q96JC9 268 aaPredicted RBP6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 LRFN5Q96NI6 719 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 TEFMQ96QE5 360 aaKnown RBP6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 CCNL2Q96S94 520 aaPredicted RBP6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 KRTAP9-2Q9BYQ4 174 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 ASPSCR1Q9BZE9 553 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 DPH1Q9BZG8 443 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 PARVBQ9HBI1 364 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 PDE7BQ9NP56 450 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 ABCF3Q9NUQ8 709 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 INTS7Q9NVH2 962 aaKnown RBP6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 AKAP7Q9P0M2 348 aaPredicted RBP6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 CTSFQ9UBX1 484 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 RUVBL1Q9Y265 456 aaKnown RBP6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 OARD1Q9Y530 152 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 A0A1B0GTL3 188 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 TMEM238LA0A1B0GVL6 79 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 FEZF1A0PJY2 475 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 E7EQ34 232 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 F8W8V4 182 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 H0YGG7 62 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 K7EM74 188 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 UBXN8O00124 270 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 PFDN6O15212 129 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 ZSCAN9O15535 394 aaPredicted RBP6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 FOXS1O43638 330 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 LCMT2O60294 686 aaKnown RBP6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 RFPL1O75677 317 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 KLF7O75840 302 aaPredicted RBP6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 IGHA1P01876 353 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 PRB1P04280 392 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 C2P06681 752 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 UMODP07911 640 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 CCDC166P0CW27 439 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 PRKAR1AP10644 381 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 NPPBP16860 134 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 DLSTP36957 453 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 RGS4P49798 205 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 VSX2P58304 361 aaPredicted RBP6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 IL2P60568 153 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 ARF3P61204 181 aaPredicted RBP6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 PRDX1Q06830 199 aaKnown RBP6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 CDC20Q12834 499 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 HYAL2Q12891 473 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 TSTA3Q13630 321 aaPredicted RBP6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 NCF4Q15080 339 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 TGFBIQ15582 683 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 SF1Q15637 639 aaKnown RBP6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 MANEAQ5SRI9 462 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 GRTP1Q5TC63 336 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 MROH9Q5TGP6 573 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 RHBDD2Q6NTF9 364 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 LCTLQ6UWM7 567 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 ISCA2Q86U28 154 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 PDSS2Q86YH6 399 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 ESX1Q8N693 406 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 ENDOVQ8N8Q3 282 aaKnown RBP6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 AMER3Q8N944 861 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 ANKRD53Q8N9V6 530 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 AENQ8WTP8 325 aaKnown RBP6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 NEIL2Q969S2 332 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 RHBDF1Q96CC6 855 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 NXNL1Q96CM4 212 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 TCTN2Q96GX1 697 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 SLC45A3Q96JT2 553 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 TSNARE1Q96NA8 513 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 FOPNLQ96NB1 174 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 ZPBPQ9BS86 351 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 TRIM55Q9BYV6 548 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 FAM129AQ9BZQ8 928 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 ACTL8Q9H568 366 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 ALG9Q9H6U8 611 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 ACTR5Q9H9F9 607 aaPredicted RBP6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 MRPS30Q9NP92 439 aaKnown RBP6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 CCDC177Q9NQR7 707 aaPredicted RBP6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 NSMCE4AQ9NXX6 385 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 PLCL2Q9UPR0 1127 aa6.87□□□□□ -1.31
TOPBP1-207ENST00000509162 PCDHGA6Q9Y5G7 932 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms