RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 OR7G3Q8NG95 312 aa8.28□□□□□ -1.08
USP46-207ENST00000508499 OR4F6Q8NGB9 312 aa8.28□□□□□ -1.08
USP46-207ENST00000508499 PPP1R14CQ8TAE6 165 aa8.28□□□□□ -1.08
USP46-207ENST00000508499 PIWIL2Q8TC59 973 aaKnown RBP8.28□□□□□ -1.08
USP46-207ENST00000508499 LRRC8CQ8TDW0 803 aa8.28□□□□□ -1.08
USP46-207ENST00000508499 TRPC4APQ8TEL6 797 aa8.28□□□□□ -1.08
USP46-207ENST00000508499 DYDC1Q8WWB3 177 aa8.28□□□□□ -1.08
USP46-207ENST00000508499 JPH3Q8WXH2 748 aaPredicted RBP8.28□□□□□ -1.08
USP46-207ENST00000508499 ZBTB9Q96C00 473 aa8.28□□□□□ -1.08
USP46-207ENST00000508499 FAR2Q96K12 515 aa8.28□□□□□ -1.08
USP46-207ENST00000508499 PRAP1Q96NZ9 151 aa8.28□□□□□ -1.08
USP46-207ENST00000508499 TGM7Q96PF1 710 aa8.28□□□□□ -1.08
USP46-207ENST00000508499 OR2A5Q96R48 311 aa8.28□□□□□ -1.08
USP46-207ENST00000508499 SIKE1Q9BRV8 207 aa8.28□□□□□ -1.08
USP46-207ENST00000508499 ACAT2Q9BWD1 397 aa8.28□□□□□ -1.08
USP46-207ENST00000508499 PDE7BQ9NP56 450 aa8.28□□□□□ -1.08
USP46-207ENST00000508499 MLXIPLQ9NP71 852 aa8.28□□□□□ -1.08
USP46-207ENST00000508499 MID1IP1Q9NPA3 183 aa8.28□□□□□ -1.08
USP46-207ENST00000508499 FBXO8Q9NRD0 319 aa8.28□□□□□ -1.08
USP46-207ENST00000508499 CUEDC1Q9NWM3 386 aaPredicted RBP8.28□□□□□ -1.08
USP46-207ENST00000508499 SIDT1Q9NXL6 827 aaKnown RBP8.28□□□□□ -1.08
USP46-207ENST00000508499 ZFP69BQ9UJL9 534 aa8.28□□□□□ -1.08
USP46-207ENST00000508499 ZNF490Q9ULM2 529 aaPredicted RBP8.28□□□□□ -1.08
USP46-207ENST00000508499 SNX6Q9UNH7 406 aa8.28□□□□□ -1.08
USP46-207ENST00000508499 A0A1B0GTL3 188 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 WDR91A4D1P6 747 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 SLC9B1P1A6NJY1 282 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 B4E171 279 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 PPP6CO00743 305 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 ZSCAN9O15535 394 aaPredicted RBP8.27□□□□□ -1.09
USP46-207ENST00000508499 ITM2AO43736 263 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 CTSVO60911 334 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 KRT6AP02538 564 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 KRT6BP04259 564 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 CHRNGP07510 517 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 SERPINA6P08185 405 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 FTH1P19P0C7X4 201 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 ALOX15P16050 662 aaPredicted RBP8.27□□□□□ -1.09
USP46-207ENST00000508499 PCSK2P16519 638 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 PRPH2P23942 346 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 TSPAN7P41732 249 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 TSFMP43897 325 aaKnown RBP8.27□□□□□ -1.09
USP46-207ENST00000508499 GCGRP47871 477 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 KRT6CP48668 564 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 RPL14P50914 215 aaKnown RBP8.27□□□□□ -1.09
USP46-207ENST00000508499 INHBCP55103 352 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 ACY1Q03154 408 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 CSTF3Q12996 717 aaKnown RBP8.27□□□□□ -1.09
USP46-207ENST00000508499 IL11RAQ14626 422 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 ZIC1Q15915 447 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 ISXQ2M1V0 245 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 TCTE1Q5JU00 501 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 TMTC4Q5T4D3 741 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 FRG2Q64ET8 278 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 ZCCHC23Q6ZST2 131 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 FAM92BQ6ZTR7 304 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 USP53Q70EK8 1073 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 TAX1BP1Q86VP1 789 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 GALNT15Q8N3T1 639 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 ARHGEF39Q8N4T4 335 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 C2orf73Q8N5S3 287 aaPredicted RBP8.27□□□□□ -1.09
USP46-207ENST00000508499 BMPERQ8N8U9 685 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 GBP7Q8N8V2 638 aaPredicted RBP8.27□□□□□ -1.09
USP46-207ENST00000508499 ANKRD53Q8N9V6 530 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 AGBL5Q8NDL9 886 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 NT5CQ8TCD5 201 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 MGARPQ8TDB4 240 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 ATP6V1E2Q96A05 226 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 CCDC74BQ96LY2 380 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 ZNF317Q96PQ6 595 aaPredicted RBP8.27□□□□□ -1.09
USP46-207ENST00000508499 DEPDC7Q96QD5 511 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 FRG2BQ96QU4 278 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 PAIP2Q9BPZ3 127 aaKnown RBP8.27□□□□□ -1.09
USP46-207ENST00000508499 PFDN4Q9NQP4 134 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 SIRT5Q9NXA8 310 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 TMEM9Q9P0T7 183 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 VTI1BQ9UEU0 232 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 ATXN7L1Q9ULK2 861 aaPredicted RBP8.27□□□□□ -1.09
USP46-207ENST00000508499 PLCL2Q9UPR0 1127 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 RNF11Q9Y3C5 154 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 TRAF6Q9Y4K3 522 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 DNAJC15Q9Y5T4 150 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 CEP250Q9BV73 2442 aa8.27□□□□□ -1.09
USP46-207ENST00000508499 HAT1O14929 419 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 AZIN1O14977 448 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 KIF1CO43896 1103 aaKnown RBP8.26□□□□□ -1.09
USP46-207ENST00000508499 EDF1O60869 148 aaKnown RBP8.26□□□□□ -1.09
USP46-207ENST00000508499 SHOX2O60902 331 aaPredicted RBP8.26□□□□□ -1.09
USP46-207ENST00000508499 ULK1O75385 1050 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 RASSF9O75901 435 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 OR4F21O95013 312 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 SEMA3DO95025 777 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 HSPA4LO95757 839 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 CHEK2O96017 543 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 CAPN1P07384 714 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 FGF5P12034 268 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 NEFHP12036 1026 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 ACPPP15309 386 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 VARSP26640 1264 aaKnown RBP8.26□□□□□ -1.09
USP46-207ENST00000508499 NOVA1P51513 510 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms