RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 GRIA1P42261 906 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 LMAN1P49257 510 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 CTSCP53634 463 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 DRG2P55039 364 aaKnown RBP4.43□□□□□ -1.7
NUP54-206ENST00000508465 POU6F1Q14863 301 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 SIX1Q15475 284 aaPredicted RBP4.43□□□□□ -1.7
NUP54-206ENST00000508465 TRIP13Q15645 432 aaPredicted RBP4.43□□□□□ -1.7
NUP54-206ENST00000508465 OASLQ15646 514 aaKnown RBP4.43□□□□□ -1.7
NUP54-206ENST00000508465 ADRM1Q16186 407 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 FNBP1LQ5T0N5 605 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 GPRC6AQ5T6X5 926 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 ZNF626Q68DY1 528 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 ITPRIPL1Q6GPH6 555 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 FAM83HQ6ZRV2 1179 aaPredicted RBP4.43□□□□□ -1.7
NUP54-206ENST00000508465 RAB11FIP2Q7L804 512 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 TAS2R42Q7RTR8 314 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 GSTA5Q7RTV2 222 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 CLNKQ7Z7G1 428 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 PIM3Q86V86 326 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 C17orf82Q86X59 251 aaPredicted RBP4.43□□□□□ -1.7
NUP54-206ENST00000508465 TRAPPC5Q8IUR0 188 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 FBXO39Q8N4B4 442 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 AFAP1L2Q8N4X5 818 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 CCDC112Q8NEF3 446 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 OR52K1Q8NGK4 314 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 BRSK1Q8TDC3 778 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 SLC37A2Q8TED4 501 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 NCSTNQ92542 709 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 FGF11Q92914 225 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 NXPE2Q96DL1 559 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 PRR11Q96HE9 360 aaPredicted RBP4.43□□□□□ -1.7
NUP54-206ENST00000508465 DNAJC1Q96KC8 554 aaKnown RBP4.43□□□□□ -1.7
NUP54-206ENST00000508465 TTC25Q96NG3 672 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 SLC46A1Q96NT5 459 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 VAT1Q99536 393 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 NRTNQ99748 197 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 FERMT1Q9BQL6 677 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 ZSCAN5AQ9BUG6 496 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 TBC1D10AQ9BXI6 508 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 TLR10Q9BXR5 811 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 AP1M1Q9BXS5 423 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 TSGA10Q9BZW7 698 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 CDH19Q9H159 772 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 CARD9Q9H257 536 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 TRABDQ9H4I3 376 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 LDAHQ9H6V9 325 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 POLR1BQ9H9Y6 1135 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 SMARCAL1Q9NZC9 954 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 VPS18Q9P253 973 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 ZNF624Q9P2J8 865 aaPredicted RBP4.43□□□□□ -1.7
NUP54-206ENST00000508465 CPNE7Q9UBL6 633 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 PISDQ9UG56 409 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 SLC23A1Q9UHI7 598 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 APPL1Q9UKG1 709 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 PSMD13Q9UNM6 376 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 WDR37Q9Y2I8 494 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 AAR2Q9Y312 384 aaKnown RBP4.43□□□□□ -1.7
NUP54-206ENST00000508465 NEU2Q9Y3R4 380 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 CFAP20Q9Y6A4 193 aaKnown RBP4.43□□□□□ -1.7
NUP54-206ENST00000508465 UNC13CQ8NB66 2214 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 KIF26BQ2KJY2 2108 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 KALRNO60229 2985 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 IGHV1OR21-1A0A087WYE8 117 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 IGHV5-10-1A0A0J9YXX1 117 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 GLYATL1P3A0A0U1RQE8 302 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 A0A1W2PS29 197 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 CCDC162PA2VCL2 907 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 A6NCN8 305 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 OR51F1A6NGY5 319 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 LINC01548A6NM66 108 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 OR52A4PA6NMU1 304 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 PDZK1P1A8MUH7 402 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 D6RAR5 112 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 CHUKO15111 745 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 KLK10O43240 276 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 LDB2O43679 373 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 SGTAO43765 313 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 NUDT21O43809 227 aaKnown RBP4.42□□□□□ -1.7
NUP54-206ENST00000508465 VEGFDO43915 354 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 PRAMEF10O60809 474 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 SRP72O76094 671 aaKnown RBP4.42□□□□□ -1.7
NUP54-206ENST00000508465 FGGP02679 453 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 PYGLP06737 847 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 APRTP07741 180 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 BRAFP15056 766 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 ITIH1P19827 911 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 MSH3P20585 1137 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 SLC5A2P31639 672 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 AKT1P31749 480 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 SPAM1P38567 509 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 GPR3P46089 330 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 VPS41P49754 854 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 CLCNKAP51800 687 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 PDX1P52945 283 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 DCDC1P59894 354 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 KRTAP10-6P60371 365 aaPredicted RBP4.42□□□□□ -1.7
NUP54-206ENST00000508465 RPS7P62081 194 aaKnown RBP4.42□□□□□ -1.7
NUP54-206ENST00000508465 CRADDP78560 199 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 XIAPP98170 497 aa4.42□□□□□ -1.7
NUP54-206ENST00000508465 ZFP36L1Q07352 338 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms