RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, human

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-205	ENST00000507316	APRT	P07741	180 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	CLEC2L	P0C7M8	214 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	DHRS4L1	P0CG22	281 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	ZNF888	P0CJ79	500 aa	Predicted RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	CBSL	P0DN79	551 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	FOLR2	P14207	255 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	CD36	P16671	472 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	PFKL	P17858	780 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	OGN	P20774	298 aa	Known RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	PRPS1L1	P21108	318 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	C5AR1	P21730	350 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	ME2	P23368	584 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	PTAFR	P25105	342 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	ATP5A1	P25705	553 aa	Known RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	PPP2R1B	P30154	601 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	SLC7A1	P30825	629 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	HOXA9	P31269	272 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	CCR7	P32248	378 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	SPR	P35270	261 aa	Predicted RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	CBS	P35520	551 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	PPM1A	P35813	382 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	SERPINF1	P36955	418 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	RFC3	P40938	356 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	CPA2	P48052	419 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	RBP2	P50120	134 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	TOB1	P50616	345 aa	Predicted RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	ATXN3	P54252	364 aa	Predicted RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	ARL4C	P56559	192 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	STARD6	P59095	220 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	RAB5B	P61020	215 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	VAMP2	P63027	116 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	GTF2B	Q00403	316 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	RHD	Q02161	417 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	HSF2	Q03933	536 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	SLC18A2	Q05940	514 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	ORC2	Q13416	577 aa	Predicted RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	PTGR1	Q14914	329 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	POLD3	Q15054	466 aa	Predicted RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	SMAD2	Q15796	467 aa	Known RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	PTPN21	Q16825	1174 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	C21orf62-AS1	Q17RA5	79 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	SYT16	Q17RD7	645 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	DPY19L1	Q2PZI1	675 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	MGAT5B	Q3V5L5	792 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	PLEKHN1	Q494U1	663 aa	Predicted RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	SV2C	Q496J9	727 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	FNDC3B	Q53EP0	1204 aa	Known RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	USP39	Q53GS9	565 aa	Known RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	PAN3	Q58A45	887 aa	Known RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	RNASE10	Q5GAN6	216 aa	Known RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	PAGE2B	Q5JRK9	111 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	TOR1AIP1	Q5JTV8	583 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	CDKL4	Q5MAI5	379 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	SLC35F1	Q5T1Q4	408 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	STXBP5	Q5T5C0	1151 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	GPRC6A	Q5T6X5	926 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	HACD4	Q5VWC8	232 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	MLIP	Q5VWP3	458 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	ANKRD22	Q5VYY1	191 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	ANKS6	Q68DC2	871 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	ARHGAP17	Q68EM7	881 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	CLEC6A	Q6EIG7	209 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	OR5M10	Q6IEU7	315 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	DENND5A	Q6IQ26	1287 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	SLC25A24	Q6NUK1	477 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	CDC73	Q6P1J9	531 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	FAM199X	Q6PEV8	388 aa	Predicted RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	ZBTB49	Q6ZSB9	765 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	LRRC8D	Q7L1W4	858 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	POLN	Q7Z5Q5	900 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	TMEM17	Q86X19	198 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	FAM131B	Q86XD5	332 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	PHF13	Q86YI8	300 aa	Predicted RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	ARID3B	Q8IVW6	561 aa	Predicted RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	RAVER1	Q8IY67	606 aa	Known RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	NRSN1	Q8IZ57	195 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	PPM1K	Q8N3J5	372 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	PRR18	Q8N4B5	295 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	CDYL2	Q8N8U2	506 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	FAM47B	Q8NA70	645 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	PAPD5	Q8NDF8	572 aa	Known RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	CHDH	Q8NE62	594 aa	Predicted RBP	4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	FAM46D	Q8NEK8	389 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	DNAAF1	Q8NEP3	725 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	BBS1	Q8NFJ9	593 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	DMBX1	Q8NFW5	382 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	OR2L3	Q8NG85	312 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	OR13J1	Q8NGT2	312 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	OR9A1P	Q8NGU1	263 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	OR2L8	Q8NGY9	312 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	RAET1E	Q8TD07	263 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	SLC20A1	Q8WUM9	679 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	TCTEX1D2	Q8WW35	142 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	HTRA1	Q92743	480 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	USP7	Q93009	1102 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	TMEM203	Q969S6	136 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	NXNL1	Q96CM4	212 aa		4.95	□□□□□ -1.62
TUSC3-205	ENST00000507316	ZNF845	Q96IR2	970 aa	Predicted RBP	4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms