RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 TBR1Q16650 682 aa18.95■□□□□ 0.62
SNX25-204ENST00000506896 C18orf21Q32NC0 220 aaPredicted RBP18.95■□□□□ 0.62
SNX25-204ENST00000506896 TECRLQ5HYJ1 363 aa18.95■□□□□ 0.62
SNX25-204ENST00000506896 CATSPEREQ5SY80 951 aa18.95■□□□□ 0.62
SNX25-204ENST00000506896 FAM199XQ6PEV8 388 aaPredicted RBP18.95■□□□□ 0.62
SNX25-204ENST00000506896 NXPE4Q6UWF7 544 aa18.95■□□□□ 0.62
SNX25-204ENST00000506896 LRRC70Q7Z2Q7 622 aa18.95■□□□□ 0.62
SNX25-204ENST00000506896 TMPRSS11BQ86T26 416 aa18.95■□□□□ 0.62
SNX25-204ENST00000506896 PLD3Q8IV08 490 aa18.95■□□□□ 0.62
SNX25-204ENST00000506896 PLD6Q8N2A8 252 aaKnown RBP18.95■□□□□ 0.62
SNX25-204ENST00000506896 MVB12AQ96EY5 273 aa18.95■□□□□ 0.62
SNX25-204ENST00000506896 AIF1LQ9BQI0 150 aa18.95■□□□□ 0.62
SNX25-204ENST00000506896 CD244Q9BZW8 370 aa18.95■□□□□ 0.62
SNX25-204ENST00000506896 EHD1Q9H4M9 534 aa18.95■□□□□ 0.62
SNX25-204ENST00000506896 AKIRIN1Q9H9L7 192 aaPredicted RBP18.95■□□□□ 0.62
SNX25-204ENST00000506896 BOD1L1Q8NFC6 3051 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 MDC1Q14676 2089 aaKnown RBP18.94■□□□□ 0.62
SNX25-204ENST00000506896 NKX2-8O15522 239 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 KLK8O60259 260 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 CDH16O75309 829 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 H2AFYO75367 372 aaKnown RBP18.94■□□□□ 0.62
SNX25-204ENST00000506896 KATNA1O75449 491 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 GFAPP14136 432 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 CXCR2P25025 360 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 PTPN4P29074 926 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 BCL6P41182 706 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 ALDH18A1P54886 795 aaKnown RBP18.94■□□□□ 0.62
SNX25-204ENST00000506896 PDK4Q16654 411 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 NDUFA9Q16795 377 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 C1orf189Q5VU69 101 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 ATG9BQ674R7 924 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 METTL2BQ6P1Q9 378 aaKnown RBP18.94■□□□□ 0.62
SNX25-204ENST00000506896 PRMT9Q6P2P2 845 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 FAM198BQ6UWH4 519 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 ZNF843Q8N446 348 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 MREGQ8N565 214 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 MFSD9Q8NBP5 474 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 CAMKVQ8NCB2 501 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 STARD8Q92502 1023 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 SCYL1Q96KG9 808 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 MRPL57Q9BQC6 102 aaKnown RBP18.94■□□□□ 0.62
SNX25-204ENST00000506896 PITHD1Q9GZP4 211 aaPredicted RBP18.94■□□□□ 0.62
SNX25-204ENST00000506896 MRPL46Q9H2W6 279 aaKnown RBP18.94■□□□□ 0.62
SNX25-204ENST00000506896 NDOR1Q9UHB4 597 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 TBK1Q9UHD2 729 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 GPN3Q9UHW5 284 aaPredicted RBP18.94■□□□□ 0.62
SNX25-204ENST00000506896 RUVBL1Q9Y265 456 aaKnown RBP18.94■□□□□ 0.62
SNX25-204ENST00000506896 FARSAQ9Y285 508 aaKnown RBP18.94■□□□□ 0.62
SNX25-204ENST00000506896 PADI2Q9Y2J8 665 aa18.94■□□□□ 0.62
SNX25-204ENST00000506896 TNPO3Q9Y5L0 923 aaKnown RBP18.94■□□□□ 0.62
SNX25-204ENST00000506896 FEZF1A0PJY2 475 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 CLGNO14967 610 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 OR1F1O43749 312 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 CCNT2O60583 730 aaKnown RBP18.93■□□□□ 0.62
SNX25-204ENST00000506896 ONECUT2O95948 504 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 SLC35G6P0C7Q6 338 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 C1GALT1C1LP0DN25 315 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 REEP5Q00765 189 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 SETDB1Q15047 1291 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 NCF4Q15080 339 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 PFKFB4Q16877 469 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 HKDC1Q2TB90 917 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 NKAIN1Q4KMZ8 207 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 SLCO4C1Q6ZQN7 724 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 VN1R4Q7Z5H5 301 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 ASPGQ86U10 573 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 SNX31Q8N9S9 440 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 MZB1Q8WU39 189 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 TM4SF19Q96DZ7 209 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 ACTL8Q9H568 366 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 SYNPO2LQ9H987 977 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 ZNF358Q9NW07 568 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 IFT80Q9P2H3 777 aaPredicted RBP18.93■□□□□ 0.62
SNX25-204ENST00000506896 OPTCQ9UBM4 332 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 CDC14AQ9UNH5 594 aa18.93■□□□□ 0.62
SNX25-204ENST00000506896 K7EPI3 171 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 PRPF4O43172 522 aaKnown RBP eCLIP18.92■□□□□ 0.62
SNX25-204ENST00000506896 LCMT2O60294 686 aaKnown RBP18.92■□□□□ 0.62
SNX25-204ENST00000506896 CREG1O75629 220 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 CAPN1P07384 714 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 GSTA1P08263 222 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 GSTM2P28161 218 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 AHRP35869 848 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 SLCO1A2P46721 670 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 MEF2AQ02078 507 aaPredicted RBP18.92■□□□□ 0.62
SNX25-204ENST00000506896 IFFO1Q0D2I5 559 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 C19orf57Q0VDD7 668 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 PWP1Q13610 501 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 COL9A2Q14055 689 aaPredicted RBP18.92■□□□□ 0.62
SNX25-204ENST00000506896 FAM53BQ14153 422 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 NAA30Q147X3 362 aaPredicted RBP18.92■□□□□ 0.62
SNX25-204ENST00000506896 FBXO48Q5FWF7 155 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 LCN10Q6JVE6 187 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 SYVN1Q86TM6 617 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 KRT78Q8N1N4 520 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 RIBC1Q8N443 379 aaPredicted RBP18.92■□□□□ 0.62
SNX25-204ENST00000506896 ENDOVQ8N8Q3 282 aaKnown RBP18.92■□□□□ 0.62
SNX25-204ENST00000506896 SLC13A3Q8WWT9 602 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 ESAMQ96AP7 390 aa18.92■□□□□ 0.62
SNX25-204ENST00000506896 FKBP10Q96AY3 582 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms