RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 MRPL14Q6P1L8 145 aaKnown RBP15.9■□□□□ 0.14
SNCA-209ENST00000506244 LRRC70Q7Z2Q7 622 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 ASPGQ86U10 573 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 MFSD9Q8NBP5 474 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 OR2Y1Q8NGV0 311 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 APOBEC4Q8WW27 367 aaKnown RBP15.9■□□□□ 0.14
SNCA-209ENST00000506244 NXNL1Q96CM4 212 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 ATOH8Q96SQ7 321 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 TMEM79Q9BSE2 394 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 PITHD1Q9GZP4 211 aaPredicted RBP15.9■□□□□ 0.14
SNCA-209ENST00000506244 SLC26A1Q9H2B4 701 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 ZNF304Q9HCX3 659 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 PSMC3IPQ9P2W1 217 aaPredicted RBP15.9■□□□□ 0.14
SNCA-209ENST00000506244 PTRH2Q9Y3E5 179 aaKnown RBP15.9■□□□□ 0.14
SNCA-209ENST00000506244 IQANK1A0A1B0GTG1 560 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 FEZF1A0PJY2 475 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 CLGNO14967 610 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 P2RX6O15547 441 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 OR1F1O43749 312 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 MYBL2P10244 700 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 ITGAXP20702 1163 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 GSTM2P28161 218 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 AHRP35869 848 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 AVPR1BP47901 424 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 HSPA7P48741 367 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 RGS1Q08116 209 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 PWP1Q13610 501 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 IL10RAQ13651 578 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 DSG2Q14126 1118 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 SLC29A2Q14542 456 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 PDK4Q16654 411 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 CATSPEREQ5SY80 951 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 ATP1A1-AS1Q5TC04 95 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 NXPE4Q6UWF7 544 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 OVCH1Q7RTY7 1134 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 VN1R4Q7Z5H5 301 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 METTL27Q8N6F8 245 aaPredicted RBP15.89■□□□□ 0.13
SNCA-209ENST00000506244 SNX31Q8N9S9 440 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 TTLQ8NG68 377 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 UBTD2Q8WUN7 234 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 UBLCP1Q8WVY7 318 aaPredicted RBP15.89■□□□□ 0.13
SNCA-209ENST00000506244 SLC13A3Q8WWT9 602 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 COL26A1Q96A83 441 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 ADNPQ9H2P0 1102 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 EHD1Q9H4M9 534 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 ANKZF1Q9H8Y5 726 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 PTBP2Q9UKA9 531 aaKnown RBP15.89■□□□□ 0.13
SNCA-209ENST00000506244 TMCO1Q9UM00 188 aa15.89■□□□□ 0.13
SNCA-209ENST00000506244 MGAQ8IWI9 3026 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 LOC400499M0QZD8 3231 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 NDUFS4O43181 175 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 H2AFYO75367 372 aaKnown RBP15.88■□□□□ 0.13
SNCA-209ENST00000506244 KLF7O75840 302 aaPredicted RBP15.88■□□□□ 0.13
SNCA-209ENST00000506244 IGHEP01854 428 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 RBP1P09455 135 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 ATXN8OSP0DMR3 200 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 GFAPP14136 432 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 GDF5P43026 501 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 SCTRP47872 440 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 GLRBP48167 497 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 NFKB2Q00653 900 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 OCA2Q04671 838 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 SSPNQ14714 243 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 ATG9BQ674R7 924 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 NIPAL1Q6NVV3 410 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 ADGRD1Q6QNK2 874 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 LCA5Q86VQ0 697 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 KRT78Q8N1N4 520 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 TRPV3Q8NET8 790 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 SLC39A7Q92504 469 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 NACC2Q96BF6 587 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 SEC16BQ96JE7 1060 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 VPS50Q96JG6 964 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 CD244Q9BZW8 370 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 C14orf105Q9NVL8 296 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 OPTCQ9UBM4 332 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 ZNF282Q9UDV7 671 aaPredicted RBP15.88■□□□□ 0.13
SNCA-209ENST00000506244 ZFP69BQ9UJL9 534 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 TUBD1Q9UJT1 453 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 MAU2Q9Y6X3 613 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 CACNA1GO43497 2377 aa15.88■□□□□ 0.13
SNCA-209ENST00000506244 URADA6NGE7 173 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 H0YIG0 161 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 UBXN8O00124 270 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 TAPBPO15533 448 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 CCNT2O60583 730 aaKnown RBP15.87■□□□□ 0.13
SNCA-209ENST00000506244 NSA2O95478 260 aaKnown RBP15.87■□□□□ 0.13
SNCA-209ENST00000506244 C1GALT1C1LP0DN25 315 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 HPDP32754 393 aaPredicted RBP15.87■□□□□ 0.13
SNCA-209ENST00000506244 GMPRP36959 345 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 OR1D4P47884 311 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 RRADP55042 308 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 POLE2P56282 527 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 MEF2AQ02078 507 aaPredicted RBP15.87■□□□□ 0.13
SNCA-209ENST00000506244 HERC3Q15034 1050 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 NKG7Q16617 165 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 C18orf21Q32NC0 220 aaPredicted RBP15.87■□□□□ 0.13
SNCA-209ENST00000506244 TMEM214Q6NUQ4 689 aaKnown RBP15.87■□□□□ 0.13
SNCA-209ENST00000506244 TIFABQ6ZNK6 161 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 COX15Q7KZN9 410 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms