RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 GCNT1Q02742 428 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 SLC20A2Q08357 652 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 ITPRIPL2Q3MIP1 535 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 EPC2Q52LR7 807 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 PHLDA2Q53GA4 152 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 HERC4Q5GLZ8 1057 aaPredicted RBP3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 RIPPLY2Q5TAB7 128 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 CES4AQ5XG92 561 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 KLHL10Q6JEL2 608 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 TTC27Q6P3X3 843 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 CTR9Q6PD62 1173 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 RHBDF2Q6PJF5 856 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 GFRALQ6UXV0 394 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 RAD9BQ6WBX8 426 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 SIGLEC15Q6ZMC9 328 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 ZNF554Q86TJ5 538 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 TMEM110Q86TL2 294 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 TMEM219Q86XT9 240 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 CDK20Q8IZL9 346 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 ZNF444Q8N0Y2 327 aaPredicted RBP3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 MUC20Q8N307 709 aaPredicted RBP3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 SIDT2Q8NBJ9 832 aaKnown RBP3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 OR11H4Q8NGC9 324 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 OR10Q1Q8NGQ4 319 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 SPATA22Q8NHS9 363 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 SPATA18Q8TC71 538 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 CHURC1Q8WUH1 139 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 TXN2Q99757 166 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 MAP3K3Q99759 626 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 SSX3Q99909 188 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 URM1Q9BTM9 101 aaKnown RBP3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 TRMT61BQ9BVS5 477 aaKnown RBP3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 SLC39A8Q9C0K1 460 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 WWTR1Q9GZV5 400 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 TRPV6Q9H1D0 765 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 ZDHHC6Q9H6R6 413 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 TLE6Q9H808 572 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 RNF121Q9H920 327 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 CHST11Q9NPF2 352 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 TCF7L2Q9NQB0 619 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 SOHLH2Q9NX45 425 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 SLC12A6Q9UHW9 1150 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 ZDHHC2Q9UIJ5 367 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 RABL2BQ9UNT1 228 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 SH3GLB1Q9Y371 365 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 IGLV5-37A0A075B6J1 123 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 ANKRD61A6NGH8 418 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 SLC15A5A6NIM6 579 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 C2orf81A6NN90 581 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 MCF2LO15068 1137 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 PSMD3O43242 534 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 RAF1P04049 648 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 PRSS2P07478 247 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 TSPY4P0CV99 314 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 TSPY10P0CW01 314 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 DLATP10515 647 aaKnown RBP3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 HSPA5P11021 654 aaKnown RBP3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 NCF1P14598 390 aaPredicted RBP3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 CDKN1AP38936 164 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 IFNAR2P48551 515 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 NUMBP49757 651 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 NR0B1P51843 470 aaKnown RBP3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 THOP1P52888 689 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 PITX1P78337 314 aaPredicted RBP3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 RPP38P78345 283 aaKnown RBP3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 CCZ1BP86790 482 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 CCZ1P86791 482 aaPredicted RBP3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 BNC1Q01954 994 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 TRAP1Q12931 704 aaKnown RBP3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 PDZK1IP1Q13113 114 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 TWIST1Q15672 202 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 CEBPEQ15744 281 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 CARTPTQ16568 116 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 ARMCX4Q5H9R4 360 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 MTX3Q5HYI7 312 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 SPDYCQ5MJ68 293 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 FAM171BQ6P995 826 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 CORO6Q6QEF8 472 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 ARSKQ6UWY0 536 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 MEX3BQ6ZN04 569 aaKnown RBP3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 SLC16A9Q7RTY1 509 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 PRUNE1Q86TP1 453 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 ODF3L1Q8IXM7 274 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 HAS2Q92819 552 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 GUCD1Q96NT3 240 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 ZNF385AQ96PM9 386 aaKnown RBP3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 NDNQ99608 321 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 PRMT1Q99873 361 aaKnown RBP3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 ASCL2Q99929 193 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 RTP3Q9BQQ7 232 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 CRACR2AQ9BSW2 395 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 LRRC2Q9BYS8 371 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 SPRTNQ9H040 489 aaPredicted RBP3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 COQ10BQ9H8M1 238 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 ECT2Q9H8V3 914 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 APOBEC3GQ9HC16 384 aaKnown RBP3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 PHPT1Q9NRX4 125 aaPredicted RBP3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 SLC38A7Q9NVC3 462 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 TMOD2Q9NZR1 351 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 POU2F3Q9UKI9 436 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms