RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 KATNA1O75449 491 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 ZWINTO95229 277 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 RPS17P08708 135 aaKnown RBP9.61□□□□□ -0.87
NUP54-203ENST00000504173 HGFP14210 728 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 FOLR1P15328 257 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 EPB42P16452 691 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 GNAZP19086 355 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 GRK3P35626 688 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 ARL1P40616 181 aaPredicted RBP9.61□□□□□ -0.87
NUP54-203ENST00000504173 CCR8P51685 355 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 MAPK10P53779 464 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 PRKAA2P54646 552 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 HERVK_113P63132 956 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 SH3BP2P78314 561 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 CSNK1G2P78368 415 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 FOXK1P85037 733 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 ACY1Q03154 408 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 FOXM1Q08050 763 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 GTF2H2Q13888 395 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 DEFB110Q30KQ9 67 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 TTMPQ5BVD1 217 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 CATSPEREQ5SY80 951 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 FCRL6Q6DN72 434 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 ZNF425Q6IV72 752 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 GTF2H2CQ6P1K8 395 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 METTL2BQ6P1Q9 378 aaKnown RBP9.61□□□□□ -0.87
NUP54-203ENST00000504173 CYB5D1Q6P9G0 228 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 NXPE4Q6UWF7 544 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 GOLGA7Q7Z5G4 137 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 PAQR7Q86WK9 346 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 TICAM1Q8IUC6 712 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 ANKRD42Q8N9B4 389 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 TMEM237Q96Q45 408 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 OR6C1Q96RD1 312 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 ERVK-6Q9BXR3 956 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 CAPS2Q9BXY5 557 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 CHRNA10Q9GZZ6 450 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 PELI2Q9HAT8 420 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 FANCEQ9HB96 536 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 FAM60AQ9NP50 221 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 OCIAD1Q9NX40 245 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 SIDT1Q9NXL6 827 aaKnown RBP9.61□□□□□ -0.87
NUP54-203ENST00000504173 PLEKHB1Q9UF11 243 aaPredicted RBP9.61□□□□□ -0.87
NUP54-203ENST00000504173 PISDQ9UG56 409 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 PCTPQ9UKL6 214 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 PLCL2Q9UPR0 1127 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 KLK4Q9Y5K2 254 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 KIF26BQ2KJY2 2108 aa9.61□□□□□ -0.87
NUP54-203ENST00000504173 A0A0J9YVX5 310 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 A0A1W2PNU3 283 aaPredicted RBP9.6□□□□□ -0.87
NUP54-203ENST00000504173 TMEM120BA0PK00 339 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 PMS2P1A4D2B8 440 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 B4E171 279 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 E2F3O00716 465 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 HAT1O14929 419 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 ATP8B1O43520 1251 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 NRP2O60462 931 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 CTSVO60911 334 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 H2AFYO75367 372 aaKnown RBP9.6□□□□□ -0.87
NUP54-203ENST00000504173 SUPT7LO94864 414 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 C1GALT1C1LP0DN25 315 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 FGF3P11487 239 aaPredicted RBP9.6□□□□□ -0.87
NUP54-203ENST00000504173 CCL4P13236 92 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 EZRP15311 586 aaKnown RBP9.6□□□□□ -0.87
NUP54-203ENST00000504173 EPORP19235 508 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 ITIH1P19827 911 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 IMPDH1P20839 514 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 HPDP32754 393 aaPredicted RBP9.6□□□□□ -0.87
NUP54-203ENST00000504173 ETV5P41161 510 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 TSPAN7P41732 249 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 GABREP78334 506 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 IRF8Q02556 426 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 ASPHQ12797 758 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 TUBB3Q13509 450 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 PCLAFQ15004 111 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 GPR19Q15760 415 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 RBBP7Q16576 425 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 XKR6Q5GH73 641 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 ZC3H12BQ5HYM0 836 aaKnown RBP9.6□□□□□ -0.87
NUP54-203ENST00000504173 ZNF678Q5SXM1 525 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 LIPMQ5VYY2 423 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 ATG9BQ674R7 924 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 SLCO4C1Q6ZQN7 724 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 PLD3Q8IV08 490 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 C10orf107Q8IVU9 208 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 DNAJC22Q8N4W6 341 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 TBC1D19Q8N5T2 526 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 CCNYL1Q8N7R7 359 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 BMPERQ8N8U9 685 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 ABHD11Q8NFV4 315 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 ZNF483Q8TF39 744 aaPredicted RBP9.6□□□□□ -0.87
NUP54-203ENST00000504173 SREK1Q8WXA9 508 aaKnown RBP9.6□□□□□ -0.87
NUP54-203ENST00000504173 ATP6V1E2Q96A05 226 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 L3HYPDHQ96EM0 354 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 NSUN5Q96P11 429 aaKnown RBP9.6□□□□□ -0.87
NUP54-203ENST00000504173 ZFYVE21Q9BQ24 234 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 AIF1LQ9BQI0 150 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 NOL11Q9H8H0 719 aaKnown RBP9.6□□□□□ -0.87
NUP54-203ENST00000504173 IPPKQ9H8X2 491 aa9.6□□□□□ -0.87
NUP54-203ENST00000504173 POLR1BQ9H9Y6 1135 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms