RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ARL15Q9NXU5 204 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 ERRFI1Q9UJM3 462 aaPredicted RBP11.35□□□□□ -0.59
MED28-203ENST00000503945 MKL2Q9ULH7 1088 aa11.35□□□□□ -0.59
MED28-203ENST00000503945 CORO1CQ9ULV4 474 aaPredicted RBP11.35□□□□□ -0.59
MED28-203ENST00000503945 NDC80O14777 642 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 KLHL18O94889 574 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 LDLRP01130 860 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 MYBL2P10244 700 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 FDXRP22570 491 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 ITGA8P53708 1063 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 AP1S2P56377 157 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 TBPL1P62380 186 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 AP2B1P63010 937 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 CSNK1G2P78368 415 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 Q0VFX4 171 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 CDC16Q13042 620 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 NR6A1Q15406 480 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 CRB2Q5IJ48 1285 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 RBM20Q5T481 1227 aaKnown RBP11.34□□□□□ -0.59
MED28-203ENST00000503945 DUPD1Q68J44 220 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 HIBCHQ6NVY1 386 aaPredicted RBP11.34□□□□□ -0.59
MED28-203ENST00000503945 LCTLQ6UWM7 567 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 LINC00696Q6ZRV3 163 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 CUZD1Q86UP6 607 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 TBC1D19Q8N5T2 526 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 AMER3Q8N944 861 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 SLC13A3Q8WWT9 602 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 ATL1Q8WXF7 558 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 SNF8Q96H20 258 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 CNDP1Q96KN2 507 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 PWWP2AQ96N64 755 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 CYTH2Q99418 400 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 NAPGQ99747 312 aaPredicted RBP11.34□□□□□ -0.59
MED28-203ENST00000503945 STMN3Q9NZ72 180 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 CHMP2BQ9UQN3 213 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 TEX264Q9Y6I9 313 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 DOCK10Q96BY6 2186 aa11.34□□□□□ -0.59
MED28-203ENST00000503945 FEZF1A0PJY2 475 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 DYTNA2CJ06 578 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 ANKUB1A6NFN9 424 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 ENO4A6NNW6 628 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 USP27XA6NNY8 438 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 EFCAB8A8MWE9 144 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 FFAR3O14843 346 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 GPR42O15529 346 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 LCMT2O60294 686 aaKnown RBP11.33□□□□□ -0.6
MED28-203ENST00000503945 BMP10O95393 424 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 NSA2O95478 260 aaKnown RBP11.33□□□□□ -0.6
MED28-203ENST00000503945 SERPINA7P05543 415 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 UQCRHP07919 91 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 PRR35P0CG20 571 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 SAT1P21673 171 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 CCR8P51685 355 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 ARG2P78540 354 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 PDIA2Q13087 525 aaKnown RBP11.33□□□□□ -0.6
MED28-203ENST00000503945 MFAP5Q13361 173 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 FRG1Q14331 258 aaKnown RBP11.33□□□□□ -0.6
MED28-203ENST00000503945 CSHL1Q14406 222 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 ZNF169Q14929 603 aaPredicted RBP11.33□□□□□ -0.6
MED28-203ENST00000503945 PHKG1Q16816 387 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 SYT16Q17RD7 645 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 MFSD4BQ5TF39 518 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 FAM45BPQ6NSW5 357 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 RIPOR1Q6ZS17 1223 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 ASPGQ86U10 573 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 ANKMY2Q8IV38 441 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 ARHGEF39Q8N4T4 335 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 BBOF1Q8ND07 529 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 CATSPER1Q8NEC5 780 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 OR1N1Q8NGS0 311 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 OR9A4Q8NGU2 314 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 OR51Q1Q8NH59 317 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 FAM45AQ8TCE6 357 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 TM4SF19Q96DZ7 209 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 PDLIM5Q96HC4 596 aaKnown RBP11.33□□□□□ -0.6
MED28-203ENST00000503945 MACROD1Q9BQ69 325 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 SGPP1Q9BX95 441 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 TRIM31Q9BZY9 425 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 SYNPO2LQ9H987 977 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 ANKHQ9HCJ1 492 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 ZFATQ9P243 1243 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 PTGFRNQ9P2B2 879 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 PCDHGA10Q9Y5H3 936 aa11.33□□□□□ -0.6
MED28-203ENST00000503945 SNRNP200O75643 2136 aaKnown RBP11.32□□□□□ -0.6
MED28-203ENST00000503945 IGHV1-45A0A0A0MS14 117 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 P2RX6O15547 441 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 TTI1O43156 1089 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 OR1F1O43749 312 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 GUCA1CO95843 209 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 STATHP02808 62 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 ENO2P09104 434 aaPredicted RBP11.32□□□□□ -0.6
MED28-203ENST00000503945 C8orf89P0DMQ9 161 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 COX6A1P12074 109 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 CDH1P12830 882 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 IL10P22301 178 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 BCL6P41182 706 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 MAT1AQ00266 395 aaKnown RBP11.32□□□□□ -0.6
MED28-203ENST00000503945 MGAT5Q09328 741 aa11.32□□□□□ -0.6
MED28-203ENST00000503945 ILF2Q12905 390 aaKnown RBP11.32□□□□□ -0.6
MED28-203ENST00000503945 MINDY4Q4G0A6 757 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms