RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 MTPNP58546 118 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 DPTQ07507 201 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 NAE1Q13564 534 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 MAPKAPK3Q16644 382 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 MMAAQ8IVH4 418 aaKnown RBP11.19□□□□□ -0.62
USP46-204ENST00000503060 OR8J3Q8NGG0 315 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 PKP4Q99569 1192 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 OR2AG1Q9H205 316 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 GULP1Q9UBP9 304 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 PCDHB3Q9Y5E6 796 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 AK5Q9Y6K8 562 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 ANTXRLA6NF34 631 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 C1QTNF3-AMACRE9PGA6 284 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 H3BM21 787 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 SEC24DO94855 1032 aaPredicted RBP11.19□□□□□ -0.62
USP46-204ENST00000503060 CD22P20273 847 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 HRH2P25021 359 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 OXTRP30559 389 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 GJA4P35212 333 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 SOX11P35716 441 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 RUNX3Q13761 415 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 CYP51A1Q16850 503 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 C21orf62-AS1Q17RA5 79 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 XKR6Q5GH73 641 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 UGT2A3Q6UWM9 527 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 DSG4Q86SJ6 1040 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 PROSER1Q86XN7 944 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 APLFQ8IW19 511 aaPredicted RBP11.19□□□□□ -0.62
USP46-204ENST00000503060 OR56A3Q8NH54 315 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 APIPQ96GX9 242 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 CMTM3Q96MX0 182 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 CDCA3Q99618 268 aaPredicted RBP11.19□□□□□ -0.62
USP46-204ENST00000503060 SRA1Q9HD15 236 aaKnown RBP11.19□□□□□ -0.62
USP46-204ENST00000503060 ZDHHC4Q9NPG8 344 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 PRSS16Q9NQE7 514 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 VAPAQ9P0L0 249 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 THAP10Q9P2Z0 257 aaPredicted RBP11.19□□□□□ -0.62
USP46-204ENST00000503060 CIDEBQ9UHD4 219 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 HCN2Q9UL51 889 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 CDH7Q9ULB5 785 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 E7EQ34 232 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 HAT1O14929 419 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 LINGO3P0C6S8 592 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 UMPSP11172 480 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 IMPA1P29218 277 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 ZNF33BQ06732 778 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 FCHO2Q0JRZ9 810 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 GTF2H3Q13889 308 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 DOC2AQ14183 400 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 SHQ1Q6PI26 577 aaKnown RBP11.18□□□□□ -0.62
USP46-204ENST00000503060 TRAPPC5Q8IUR0 188 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 CFAP206Q8IYR0 622 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 TRPV3Q8NET8 790 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 CXorf40AQ8TE69 158 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 MED8Q96G25 268 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 ZNF597Q96LX8 424 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 OR52E6Q96RD3 313 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 HDAC8Q9BY41 377 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 MFRPQ9BY79 579 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 NKX2-4Q9H2Z4 354 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 RPF2Q9H7B2 306 aaKnown RBP11.18□□□□□ -0.62
USP46-204ENST00000503060 TRIM39Q9HCM9 518 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 ATXN10Q9UBB4 475 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 CHD9Q3L8U1 2897 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 KANSL1LA0AUZ9 987 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 C1orf105O95561 183 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 SLC16A8O95907 504 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 EPHX1P07099 455 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 PCSK2P16519 638 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 AMD1P17707 334 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 SDC1P18827 310 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 TACR1P25103 407 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 NOS3P29474 1203 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 P2RY2P41231 377 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 CHN2P52757 468 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 PRKCQQ04759 706 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 CNTN1Q12860 1018 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 CSTF3Q12996 717 aaKnown RBP11.18□□□□□ -0.62
USP46-204ENST00000503060 GRM2Q14416 872 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 NRF1Q16656 503 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 C6orf52Q5T4I8 152 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 GLYATQ6IB77 296 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 MSRB3Q8IXL7 192 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 RNF175Q8N4F7 328 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 FBXO15Q8NCQ5 510 aaPredicted RBP11.18□□□□□ -0.62
USP46-204ENST00000503060 BIRC7Q96CA5 298 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 ERLEC1Q96DZ1 483 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 FCRL1Q96LA6 429 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 APOLD1Q96LR9 279 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 HS6ST2Q96MM7 605 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 TSSK3Q96PN8 268 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 OR4K3Q96R72 315 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 SLC29A1Q99808 456 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 CIB1Q99828 191 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 PBX4Q9BYU1 374 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 PLA2G2FQ9BZM2 168 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 SCPEP1Q9HB40 452 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 AGPAT4Q9NRZ5 378 aa11.18□□□□□ -0.62
USP46-204ENST00000503060 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.18□□□□□ -0.62
USP46-204ENST00000503060 ADGRE2Q9UHX3 823 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms