RNA–Protein interactions for RNA: ENST00000503030.1

TSPAN17-203, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 909 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-203ENST00000503030 REEP5Q00765 189 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 SETDB1Q15047 1291 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 RBBP5Q15291 538 aaKnown RBP16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 MUM1Q2TAK8 710 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 MLIPQ5VWP3 458 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 C16orf46Q6P387 395 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 FAM198BQ6UWH4 519 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 ZNF517Q6ZMY9 492 aaPredicted RBP16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 SLCO4C1Q6ZQN7 724 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 ASPGQ86U10 573 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 CYP4X1Q8N118 509 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 PTGR2Q8N8N7 351 aaPredicted RBP16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 ENDOVQ8N8Q3 282 aaKnown RBP16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 MFSD9Q8NBP5 474 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 UBTD2Q8WUN7 234 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 THAP11Q96EK4 314 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 SLC45A3Q96JT2 553 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 C10orf90Q96M02 699 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 DPH2Q9BQC3 489 aaPredicted RBP16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 MRPL57Q9BQC6 102 aaKnown RBP16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 CAPS2Q9BXY5 557 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 PRORYQ9H606 182 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 GPRC5BQ9NZH0 403 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 IFT80Q9P2H3 777 aaPredicted RBP16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 GPN3Q9UHW5 284 aaPredicted RBP16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 LHX6Q9UPM6 363 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 MAU2Q9Y6X3 613 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 FER1L5A0AVI2 2057 aa16.03■□□□□ 0.16
TSPAN17-203ENST00000503030 ITPR1Q14643 2758 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 LRRC14BA6NHZ5 514 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 ZNF891A8MT65 544 aaPredicted RBP16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 K7EPI3 171 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 TXNDC9O14530 226 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 NKX2-8O15522 239 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 SMIM24O75264 130 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 CDH16O75309 829 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 H2AFYO75367 372 aaKnown RBP16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 C1GALT1C1LP0DN25 315 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 OR1D4P47884 311 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 ALDH18A1P54886 795 aaKnown RBP16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 NFKB2Q00653 900 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 SLBPQ14493 270 aaKnown RBP eCLIP16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 NCF4Q15080 339 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 NKAIN1Q4KMZ8 207 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 XKR6Q5GH73 641 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 GPR155Q7Z3F1 870 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 CNPY4Q8N129 248 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 CAMKVQ8NCB2 501 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 ACMSDQ8TDX5 336 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 SLC13A3Q8WWT9 602 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 PHF21BQ96EK2 531 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 GPR87Q9BY21 358 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 MRPL46Q9H2W6 279 aaKnown RBP16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 ACTL8Q9H568 366 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 ENAMQ9NRM1 1142 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 FARSAQ9Y285 508 aaKnown RBP16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 ANGPTL3Q9Y5C1 460 aa16.02■□□□□ 0.16
TSPAN17-203ENST00000503030 SEC16AO15027 2179 aa16.02■□□□□ 0.15
TSPAN17-203ENST00000503030 NDUFS4O43181 175 aa16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 KLK8O60259 260 aa16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 SIX3O95343 332 aaPredicted RBP16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 SLC35G6P0C7Q6 338 aa16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 ITGAXP20702 1163 aa16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 PTPN4P29074 926 aa16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 ERV3-1Q14264 604 aa16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 ATP1A1-AS1Q5TC04 95 aa16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 FAM69BQ5VUD6 431 aa16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 ATG9BQ674R7 924 aa16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 MREGQ8N565 214 aa16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 TEX9Q8N6V9 391 aa16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 ZCCHC10Q8TBK6 192 aa16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 COL26A1Q96A83 441 aa16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 C17orf62Q9BQA9 187 aa16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 GEMIN8Q9NWZ8 242 aaKnown RBP16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 TMEM216Q9P0N5 145 aa16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 PLAAQ9Y263 795 aa16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 MRPS2Q9Y399 296 aaKnown RBP16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 PCDHGA6Q9Y5G7 932 aa16.01■□□□□ 0.15
TSPAN17-203ENST00000503030 LOC400499M0QZD8 3231 aa16■□□□□ 0.15
TSPAN17-203ENST00000503030 PRAMEF4O60810 478 aa16■□□□□ 0.15
TSPAN17-203ENST00000503030 CREG1O75629 220 aa16■□□□□ 0.15
TSPAN17-203ENST00000503030 CAPN1P07384 714 aa16■□□□□ 0.15
TSPAN17-203ENST00000503030 RAB40ALP0C0E4 278 aa16■□□□□ 0.15
TSPAN17-203ENST00000503030 EPB42P16452 691 aa16■□□□□ 0.15
TSPAN17-203ENST00000503030 EPORP19235 508 aa16■□□□□ 0.15
TSPAN17-203ENST00000503030 CXCR2P25025 360 aa16■□□□□ 0.15
TSPAN17-203ENST00000503030 EEF1DP29692 281 aaKnown RBP16■□□□□ 0.15
TSPAN17-203ENST00000503030 SCTRP47872 440 aa16■□□□□ 0.15
TSPAN17-203ENST00000503030 EMP3P54852 163 aa16■□□□□ 0.15
TSPAN17-203ENST00000503030 IRF8Q02556 426 aa16■□□□□ 0.15
TSPAN17-203ENST00000503030 CHIT1Q13231 466 aa16■□□□□ 0.15
TSPAN17-203ENST00000503030 DOC2AQ14183 400 aa16■□□□□ 0.15
TSPAN17-203ENST00000503030 RASA2Q15283 850 aa16■□□□□ 0.15
TSPAN17-203ENST00000503030 NDUFA9Q16795 377 aa16■□□□□ 0.15
TSPAN17-203ENST00000503030 GARNL3Q5VVW2 1013 aa16■□□□□ 0.15
TSPAN17-203ENST00000503030 PRAMEF9Q5VWM5 478 aa16■□□□□ 0.15
TSPAN17-203ENST00000503030 LCA5Q86VQ0 697 aa16■□□□□ 0.15
TSPAN17-203ENST00000503030 KRT78Q8N1N4 520 aa16■□□□□ 0.15
TSPAN17-203ENST00000503030 ANKRD53Q8N9V6 530 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms